Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR4769-201ENST00000584126 77 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AC104984.5-201ENST00000586878 94 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 AC105148.1-201ENST00000604961 409 ntBASIC-0.28□□□□□ -2.45
LINC01549A6NIU2 MIR135A2-201ENST00000384854 100 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 AL359704.1-201ENST00000411586 781 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 RPL26P27-201ENST00000414397 437 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 PTGES3P1-201ENST00000439531 483 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 RAB11AP1-201ENST00000442978 646 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 MTCO2P25-201ENST00000447065 681 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 RNU6-27P-201ENST00000516146 107 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 RNU4-77P-201ENST00000516692 156 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 RNU6-165P-201ENST00000517170 99 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 AP000763.2-201ENST00000540641 163 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 AC105036.1-201ENST00000566222 271 ntBASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.29□□□□□ -2.46
LINC01549A6NIU2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 RNU6-546P-201ENST00000383991 107 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 ZNF965P-201ENST00000432501 817 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 RNA5SP227-201ENST00000516184 113 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 AC023050.2-201ENST00000544968 387 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 MIR3167-201ENST00000579623 85 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 MIR4514-201ENST00000581410 57 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 AC090517.2-201ENST00000614966 680 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 AC007742.2-201ENST00000618226 398 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 AC123767.1-202ENST00000620407 817 ntBASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.3□□□□□ -2.46
LINC01549A6NIU2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 RNU6-31P-201ENST00000384388 108 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AL356776.1-201ENST00000406574 447 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 MIR1302-8-201ENST00000408342 128 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 MIR1303-201ENST00000408625 86 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 RNU2-43P-201ENST00000410306 190 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AL353621.1-201ENST00000418219 243 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 RNU6-488P-201ENST00000515918 99 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC079598.5-201ENST00000547460 117 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 MIR4290-201ENST00000583807 95 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 SNORA4-201ENST00000584302 138 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC107304.1-201ENST00000604229 296 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC009032.1-201ENST00000617574 431 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 AC010487.4-201ENST00000637027 61 ntBASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.31□□□□□ -2.46
LINC01549A6NIU2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 RNU6-441P-201ENST00000384545 106 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 BX664727.1-201ENST00000416024 466 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AL606662.1-201ENST00000445763 553 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 SNORD79.1-201ENST00000516069 84 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AC027104.1-201ENST00000563702 681 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AC005951.2-201ENST00000576282 495 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AC012557.2-201ENST00000605919 418 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 AC068722.2-201ENST00000618734 544 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 MIR4315-1-201ENST00000636800 73 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 MIR4315-2-201ENST00000640925 73 ntBASIC-0.32□□□□□ -2.46
LINC01549A6NIU2 RNU6-23P-201ENST00000363283 107 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 SNORA42.1-201ENST00000363515 137 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 RPL21P1-201ENST00000399532 476 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 AC067940.1-201ENST00000458411 300 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 SNORA31.2-201ENST00000516019 134 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 MIR6715A-201ENST00000615929 79 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 AC022709.1-201ENST00000615967 87 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 AL109620.1-201ENST00000618738 1197 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.33□□□□□ -2.46
LINC01549A6NIU2 SNORA25.9-201ENST00000365087 128 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 SNORD51-201ENST00000384320 80 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 RNU6-700P-201ENST00000391043 107 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 RNA5SP496-201ENST00000391240 109 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 RNU1-139P-201ENST00000391307 165 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 AL512637.2-201ENST00000431287 1256 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 THAP5P1-201ENST00000439089 262 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 DAP3P1-201ENST00000441522 278 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 NEFMP1-201ENST00000443423 1006 ntBASIC-0.34□□□□□ -2.46
LINC01549A6NIU2 MTND2P4-201ENST00000445034 1004 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 250.1 ms