Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PTPDC1A2A3K4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 CUL1P1-201ENST00000509510 2425 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU1-75P-201ENST00000347264 129 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1115P-201ENST00000362490 106 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.31-201ENST00000362574 102 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU1-70P-201ENST00000362618 164 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1059P-201ENST00000363752 98 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 SNORA22B-201ENST00000383876 138 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU6-325P-201ENST00000411132 105 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AL133396.1-201ENST00000432048 687 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 CYCSP32-201ENST00000440548 321 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 FTH1P25-201ENST00000447665 469 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 MTATP6P7-201ENST00000453315 681 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 HMGN1P18-201ENST00000457642 277 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 HMGN1P10-201ENST00000474557 553 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 RNU1-103P-201ENST00000516502 125 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AC109479.2-201ENST00000517842 174 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 HMGB1P14-201ENST00000557424 591 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AC005899.2-201ENST00000584353 90 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AC016925.2-201ENST00000605108 242 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AC011890.2-201ENST00000613393 294 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 AL161629.2-201ENST00000615347 275 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 MIR7112-201ENST00000616126 65 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 U2.21-201ENST00000637295 81 ntBASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PTPDC1A2A3K4 ZNF807-201ENST00000328088 1707 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.28-201ENST00000362554 111 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RNU6-842P-201ENST00000384269 107 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RNU6-933P-201ENST00000384424 107 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RNU6-790P-201ENST00000384479 105 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RNU6-308P-201ENST00000390957 107 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RPS15AP10-201ENST00000432472 382 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 AL136097.1-201ENST00000456945 913 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 CEACAMP4-201ENST00000457676 421 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 AC008571.1-201ENST00000467232 300 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 RNU6-988P-201ENST00000519081 107 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 CPDP1-201ENST00000579660 283 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 AL162713.1-201ENST00000604480 262 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 AL355802.3-201ENST00000607571 545 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 Z83843.1-201ENST00000604070 3685 ntBASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
PTPDC1A2A3K4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-778P-201ENST00000363269 103 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-596P-201ENST00000365395 98 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-738P-201ENST00000384531 106 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1160P-201ENST00000384546 104 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-331P-201ENST00000384724 107 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 MIR888-201ENST00000401186 77 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RPL26P27-201ENST00000414397 437 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 HMGN2P30-201ENST00000423237 256 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNA5SP310-201ENST00000459084 116 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RPS4XP22-201ENST00000480755 780 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-470P-201ENST00000515954 104 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 SCARNA16.2-201ENST00000516520 172 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNA5SP384-201ENST00000516615 116 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1183P-201ENST00000517054 60 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 H3F3AP1-201ENST00000559984 334 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 CYCSP39-201ENST00000565821 309 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC109446.1-201ENST00000566172 220 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 MTND5P30-201ENST00000452896 1731 ntBASIC3.87□□□□□ -1.79
PTPDC1A2A3K4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 RNU6-827P-201ENST00000365553 106 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 RNU1-73P-201ENST00000383971 164 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AL591034.1-201ENST00000407447 340 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 Z92545.1-201ENST00000411782 234 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AL117339.3-201ENST00000418733 162 ntBASIC3.86□□□□□ -1.79
PTPDC1A2A3K4 AC018865.2-201ENST00000423631 129 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms