Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC004944.1-201ENST00000517807 3059 ntBASIC2.4□□□□□ -2.02
TRBV4-1A0A0J9YWV2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TRBV4-1A0A0J9YWV2 RNU6-266P-201ENST00000364225 107 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 U3.12-201ENST00000364498 214 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 Y_RNA.295-201ENST00000364918 102 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-748P-201ENST00000384648 107 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-19P-201ENST00000384718 107 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL356057.3-201ENST00000402607 340 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNA5SP21-201ENST00000410917 96 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PTGES3P4-201ENST00000426243 356 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC087884.1-201ENST00000469738 328 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RPL7P49-201ENST00000471402 708 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC092989.1-201ENST00000481235 277 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SEM1P1-201ENST00000506694 209 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA14.1-201ENST00000516113 141 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-1038P-201ENST00000516516 104 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CYCSP27-201ENST00000527643 293 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC092807.2-201ENST00000609367 243 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC011890.2-201ENST00000613393 294 ntBASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA68.1-201ENST00000364537 132 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU6-877P-201ENST00000383868 107 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU1-109P-201ENST00000383960 147 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNA5SP219-201ENST00000390940 113 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL513475.1-201ENST00000406602 315 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC004383.1-201ENST00000438135 289 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC011816.1-201ENST00000441346 546 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL135938.1-201ENST00000443141 297 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 HMGN2P26-201ENST00000463169 339 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MRPL42P6-201ENST00000486397 371 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AIG1P1-201ENST00000503376 148 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNU5F-8P-201ENST00000515941 111 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CKS1BP7-201ENST00000522230 235 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC022080.3-201ENST00000544433 482 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA59B-202ENST00000578183 701 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC092747.3-201ENST00000603769 301 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 Z82243.1-201ENST00000609432 473 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL162274.2-201ENST00000614406 332 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC002553.4-201ENST00000616896 331 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC026585.1-201ENST00000619582 524 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL160394.1-201ENST00000624765 724 ntBASIC2.39□□□□□ -2.03
TRBV4-1A0A0J9YWV2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 U3.26-201ENST00000391236 204 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 RNA5SP118-201ENST00000410385 109 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL096701.2-201ENST00000416920 238 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 USP9YP20-201ENST00000419224 558 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 TOMM20P4-201ENST00000427861 435 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC087499.2-201ENST00000432861 149 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MTATP6P13-201ENST00000438531 667 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC117503.1-201ENST00000472241 394 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA31.6-201ENST00000516241 130 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 SNORA43.2-201ENST00000516652 128 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC023050.3-201ENST00000541142 333 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 CR383656.8-201ENST00000549046 145 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 BNIP3P25-201ENST00000596023 559 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 APOOP1-201ENST00000604695 592 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC123912.5-201ENST00000605470 343 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AC138627.2-201ENST00000624202 601 ntBASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRBV4-1A0A0J9YWV2 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms