Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 AL163152.1-201ENST00000642001 374 ntBASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV3A0A0B4J244 RBBP8P1-201ENST00000449447 1844 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 SNORD115-3-201ENST00000363100 82 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-622P-201ENST00000384272 103 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 SNORA40.2-201ENST00000390847 128 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 CBX3P9-201ENST00000402326 552 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AP000275.1-201ENST00000411943 390 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 ISCA1P6-201ENST00000427740 390 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 Z82205.1-201ENST00000428456 297 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AL078601.1-201ENST00000444542 271 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AL035666.1-201ENST00000446195 348 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 MTCO1P27-201ENST00000448269 226 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 TOMM22P6-201ENST00000465035 409 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC005908.1-201ENST00000468701 347 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC005840.1-201ENST00000498412 377 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 SNORA31.19-201ENST00000517079 126 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AP003355.1-201ENST00000518956 587 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 TRAV32-201ENST00000553993 340 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 SNORA77B-201ENST00000578179 125 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 BNIP3P9-201ENST00000603714 553 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 RPL21P136-201ENST00000605378 396 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AL022345.1-201ENST00000607292 135 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC012360.2-201ENST00000609349 391 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 AC093648.1-201ENST00000623546 606 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 MIR3529-201ENST00000637713 78 ntBASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
TRAV3A0A0B4J244 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 MIR302D-201ENST00000362275 68 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 Y_RNA.67-201ENST00000362870 100 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-288P-201ENST00000363690 104 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 SNORD14B-201ENST00000364533 90 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-392P-201ENST00000364926 101 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 MIR513A1-201ENST00000385138 129 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 RN7SKP266-201ENST00000410232 287 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 MED28P2-201ENST00000475771 317 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AL121594.1-201ENST00000475906 575 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC025465.3-201ENST00000510570 311 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 RNA5SP445-201ENST00000515889 115 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 CR383656.8-201ENST00000549046 145 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AL512347.1-201ENST00000566420 503 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC005668.1-201ENST00000571142 476 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC098848.2-201ENST00000588023 330 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 Z82243.1-201ENST00000609432 473 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 AC092125.1-201ENST00000562568 1995 ntBASIC0.88□□□□□ -2.27
TRAV3A0A0B4J244 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-942P-201ENST00000363002 107 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-289P-201ENST00000364093 107 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-777P-201ENST00000364265 104 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 SNORA25.9-201ENST00000365087 128 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-939P-201ENST00000384634 107 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 MIR301A-201ENST00000385261 86 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 USP9YP11-201ENST00000427537 717 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 TOMM22P2-201ENST00000430735 237 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RPS6P15-201ENST00000431996 751 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC010409.1-201ENST00000487382 476 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 MTCYBP40-201ENST00000509390 1135 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 MTCO3P27-201ENST00000514397 196 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNVU1-2-201ENST00000516326 135 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 RNU6-143P-201ENST00000516942 93 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 MIR3169-201ENST00000578032 83 ntBASIC0.87□□□□□ -2.27
TRAV3A0A0B4J244 AC093788.1-201ENST00000609356 927 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms