Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 AC020550.1-201ENST00000447385 163 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 TOMM22P6-201ENST00000465035 409 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AC134050.1-201ENST00000495088 933 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 SNORA3.4-201ENST00000515969 96 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 VN1R82P-201ENST00000601481 356 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 AL133445.2-201ENST00000611191 527 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV1-2A0A0B4J238 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
TRAV1-2A0A0B4J238 RNU6-1010P-201ENST00000362757 107 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 SNORD56.4-201ENST00000363883 71 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 SUGT1P1-201ENST00000379514 476 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-17P-201ENST00000384245 107 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-18P-201ENST00000384527 107 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR186-201ENST00000384988 86 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-1300P-201ENST00000391046 108 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AL590084.2-201ENST00000401481 382 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-575P-201ENST00000411326 105 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AL592045.1-201ENST00000429867 352 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 FTH1P12-201ENST00000432137 551 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC092628.1-201ENST00000436250 252 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 RPL39P6-201ENST00000448289 150 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC132479.1-201ENST00000449160 144 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 MTND2P6-201ENST00000455337 1030 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC023194.1-201ENST00000493084 308 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AL356057.1-201ENST00000533798 831 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC109446.2-201ENST00000567872 497 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC012065.4-201ENST00000602445 679 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC073410.2-201ENST00000603240 332 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC008759.3-201ENST00000613300 508 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AL590240.4-201ENST00000616908 390 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 AC084824.4-201ENST00000620106 731 ntBASIC0.34□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR194-1-201ENST00000384892 85 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 MTCO2P5-201ENST00000422621 426 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 TIMM9P1-201ENST00000436122 256 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 HSPE1P9-201ENST00000440046 311 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 BRK1P2-201ENST00000442875 223 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 MTATP6P30-201ENST00000443540 664 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC130509.1-201ENST00000464158 433 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RPL30P6-201ENST00000475925 342 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RAP1BP2-201ENST00000478270 544 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 TMEM251P1-201ENST00000503717 318 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC091860.1-201ENST00000505723 432 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 TRMT112P2-201ENST00000512910 132 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-965P-201ENST00000516721 96 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RN7SKP88-201ENST00000516847 250 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RN7SKP256-201ENST00000517201 314 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC022861.1-201ENST00000522981 663 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 AC008015.1-201ENST00000555505 465 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR3664-201ENST00000579074 99 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR4637-201ENST00000582405 84 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 7SK.8-201ENST00000612110 250 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 7SK.11-201ENST00000615477 250 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 RMST_10.1-201ENST00000616309 154 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 7SK.13-201ENST00000622040 250 ntBASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
TRAV1-2A0A0B4J238 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 MIR96-201ENST00000362288 78 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-28P-201ENST00000362378 107 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-529P-201ENST00000363383 104 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 Y_RNA.234-201ENST00000364409 97 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-359P-201ENST00000365466 108 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 RNU6-160P-201ENST00000384591 107 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 DHFRP6-201ENST00000401776 268 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AL031577.2-201ENST00000404133 280 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AL163195.1-201ENST00000496941 348 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 TRBVA-201ENST00000498804 316 ntBASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV1-2A0A0B4J238 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms