Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AL365434.2-201ENST00000607979 234 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC018926.1-201ENST00000616335 435 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 AC084824.4-201ENST00000620106 731 ntBASIC0.33□□□□□ -2.36
TRAV13-2A0A0B4J235 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-492P-201ENST00000363035 104 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-188P-201ENST00000364207 107 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORD115-48-201ENST00000364764 76 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-53P-201ENST00000365367 106 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-796P-201ENST00000391086 107 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 CBX3P6-201ENST00000430257 527 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 SNRPEP7-201ENST00000438350 220 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 GTF2IP13-201ENST00000438487 386 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RPL30P6-201ENST00000475925 342 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC074344.1-201ENST00000512823 224 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-991P-201ENST00000516168 107 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP121-201ENST00000516537 101 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 SNORA70.22-201ENST00000517160 124 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC022861.1-201ENST00000522981 663 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC233266.2-201ENST00000567067 528 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AF038458.1-201ENST00000588406 262 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC022432.1-201ENST00000595739 310 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC093788.1-201ENST00000609356 927 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 uc_338.15-201ENST00000615470 191 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC006213.5-201ENST00000619673 288 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC093648.1-201ENST00000623546 606 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 AC068647.2-201ENST00000637380 353 ntBASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-28P-201ENST00000362378 107 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-529P-201ENST00000363383 104 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 Y_RNA.234-201ENST00000364409 97 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-392P-201ENST00000364926 101 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-898P-201ENST00000365627 104 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-482P-201ENST00000391068 107 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AL590084.2-201ENST00000401481 382 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC138623.1-201ENST00000418060 216 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 BRK1P2-201ENST00000442875 223 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC015712.3-201ENST00000559380 164 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 CYP4A27P-201ENST00000567218 190 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 VN1R82P-201ENST00000601481 356 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC008759.3-201ENST00000613300 508 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC130324.3-201ENST00000614165 542 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 AC120349.3-201ENST00000624377 529 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR1248-201ENST00000629190 106 ntBASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
TRAV13-2A0A0B4J235 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 Y_RNA.140-201ENST00000363474 103 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-17P-201ENST00000384245 107 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RNU6-18P-201ENST00000384527 107 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR217-201ENST00000384817 110 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR520A-201ENST00000384862 85 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 MIR194-1-201ENST00000384892 85 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 FGF7P8-201ENST00000402994 292 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RPS3AP1-201ENST00000413190 320 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 MTCO2P5-201ENST00000422621 426 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 GTF2IP3-201ENST00000433887 494 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 MTATP6P30-201ENST00000443540 664 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 RPL39P6-201ENST00000448289 150 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 TMEM251P1-201ENST00000503717 318 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC091860.1-201ENST00000505723 432 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC110760.3-202ENST00000515177 371 ntBASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.3□□□□□ -2.36
TRAV13-2A0A0B4J235 AC004812.1-201ENST00000540773 146 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms