Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC079741.1-201ENST00000321498 212 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNU6-899P-201ENST00000363947 107 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 SNORA7.2-201ENST00000364446 145 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNA5SP505-201ENST00000364748 108 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNU6-1325P-201ENST00000364905 105 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 SNORA18.3-201ENST00000384122 132 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNU6-763P-201ENST00000390865 106 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNU6-578P-201ENST00000390980 103 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 SNORA26.3-201ENST00000391119 136 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RNU6-381P-201ENST00000391259 108 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 TPT1P12-201ENST00000448968 492 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 RPL23AP56-201ENST00000460778 453 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC091179.3-201ENST00000474761 144 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC022616.8-201ENST00000533569 253 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 MIR4270-201ENST00000581799 70 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AL162713.1-201ENST00000604480 262 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AL078604.3-201ENST00000615580 211 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 AC015914.2-201ENST00000618167 288 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 Z73965.1-201ENST00000623412 2297 ntBASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HRH3Q9Y5N1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 RNU6-727P-201ENST00000363592 107 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 RNU1-32P-201ENST00000363937 159 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC096649.2-201ENST00000416186 393 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC245028.1-201ENST00000423259 256 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC021269.2-201ENST00000532318 330 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AP006289.1-201ENST00000538089 277 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AL451007.1-201ENST00000595491 289 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC069294.1-201ENST00000608397 350 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 MIR378J-201ENST00000611988 109 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 TUG1_4.1-201ENST00000619464 181 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AC112200.1-201ENST00000625015 234 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 AL022322.2-201ENST00000624072 20397 ntBASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HRH3Q9Y5N1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AL133383.2-201ENST00000622958 2336 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 Y_RNA.337-201ENST00000365312 102 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 SNORA8.3-201ENST00000384679 139 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 U3.40-201ENST00000408706 208 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AC016397.1-201ENST00000412463 242 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AC007738.1-201ENST00000413892 348 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 RNU6-107P-201ENST00000516643 102 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 CYP4A27P-201ENST00000567218 190 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AC090616.3-201ENST00000582184 217 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 MIR6780A-201ENST00000615089 68 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 BMS1P21-201ENST00000634565 365 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 AP000542.2-201ENST00000623199 6179 ntBASIC4.49□□□□□ -1.69
HRH3Q9Y5N1 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms