Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 CKS1BP7-201ENST00000522230 235 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AP004371.1-201ENST00000525240 214 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 MIR4480-201ENST00000582492 71 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AL031274.2-201ENST00000599419 203 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 BMS1P21-201ENST00000634565 365 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 U2.21-201ENST00000637295 81 ntBASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.01□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.120-201ENST00000363304 110 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.243-201ENST00000364481 109 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 RNY3P5-201ENST00000384127 102 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 MIR548A1-201ENST00000385041 97 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC019205.3-201ENST00000424573 156 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 PSMD10P3-201ENST00000437000 448 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC006028.1-201ENST00000438379 402 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC083982.1-201ENST00000485679 344 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 MIR378D2-201ENST00000580636 98 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 SNRPGP20-201ENST00000604477 205 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC091905.4-201ENST00000623432 202 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 MIR3529-201ENST00000637713 78 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC068647.1-201ENST00000489539 2265 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 DPY19L2P2-203ENST00000435536 1858 ntBASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PCDHB3Q9Y5E6 A2MP1-204ENST00000566278 4130 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AL672167.1-204ENST00000641875 3017 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 U3.3-201ENST00000362986 216 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SNORD45.3-201ENST00000363836 72 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-383P-201ENST00000410864 94 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.617-201ENST00000410920 90 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 snoU13.20-201ENST00000459180 104 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AC097484.1-201ENST00000471148 389 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 RPS29P22-201ENST00000472363 168 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SNORA70.16-201ENST00000516390 95 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-638P-201ENST00000516582 104 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 RN7SKP260-201ENST00000516907 149 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AP003327.1-201ENST00000529684 127 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AC015813.4-201ENST00000610469 179 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SMG1P4-204ENST00000523028 4131 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AL139811.1-201ENST00000424779 2299 ntBASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.99□□□□□ -1.61
PCDHB3Q9Y5E6 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-778P-201ENST00000363269 103 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 U1.1-201ENST00000384101 164 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 RNU6-106P-201ENST00000384405 107 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 MIR1182-201ENST00000408363 97 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 Y_RNA.622-201ENST00000411091 108 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 OR2AH1P-201ENST00000425717 928 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC090525.1-201ENST00000479116 478 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC103975.1-201ENST00000482506 483 ntBASIC4.98□□□□□ -1.61
PCDHB3Q9Y5E6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms