Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-562P-201ENST00000362731 107 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 MIR490-201ENST00000384865 128 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 MIR634-201ENST00000385208 97 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AL445529.1-201ENST00000398713 389 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 RPS29P13-201ENST00000402041 169 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 MIR1289-1-201ENST00000408836 144 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 PDCL2P1-201ENST00000419302 352 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AL591043.1-201ENST00000432461 424 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 SNAP23P1-201ENST00000433229 246 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC004383.1-201ENST00000438135 289 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 HMGN1P18-201ENST00000457642 277 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC133134.1-201ENST00000466800 359 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC107626.1-201ENST00000471084 183 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 RN7SL601P-201ENST00000471221 293 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC010265.1-201ENST00000513509 211 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-566P-201ENST00000516790 107 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 Y_RNA.702-201ENST00000516843 96 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC107934.2-201ENST00000518653 310 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC010186.2-204ENST00000537668 439 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 SCOCP1-201ENST00000554676 349 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 VN1R107P-201ENST00000601784 209 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 ELOCP5-201ENST00000604924 333 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC005000.2-201ENST00000605468 310 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 uc_338.14-201ENST00000613162 166 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC073476.4-201ENST00000628409 72 ntBASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
LSM4Q9Y4Z0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 Y_RNA.111-201ENST00000363248 100 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-527P-201ENST00000363425 104 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 SNORD81.2-201ENST00000365153 76 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-487P-201ENST00000365430 104 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 MIR147B-201ENST00000390185 80 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC017079.2-201ENST00000416102 485 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RPL7P37-201ENST00000425095 738 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 USP9YP8-201ENST00000441913 500 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 BX510359.1-201ENST00000456973 237 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RPS27P29-201ENST00000463110 252 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC091951.2-201ENST00000500762 203 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC008526.1-201ENST00000509149 338 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC096745.1-201ENST00000509945 370 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RNA5SP454-201ENST00000517231 127 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RN7SKP57-201ENST00000517248 293 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC005476.1-201ENST00000554427 397 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC103996.1-201ENST00000555468 102 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 RPL23AP78-201ENST00000599928 470 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC005046.1-201ENST00000608515 625 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC104260.1-201ENST00000616660 539 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC005858.4-201ENST00000623191 700 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 AC092435.3-201ENST00000565538 3654 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 MTND4P12-201ENST00000498999 1377 ntBASIC2.74□□□□□ -1.97
LSM4Q9Y4Z0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 SNORD9-201ENST00000362566 104 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RNA5SP383-201ENST00000362934 120 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-428P-201ENST00000362942 107 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RNU6-105P-201ENST00000363909 104 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 U3.26-201ENST00000391236 204 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 AL360182.1-201ENST00000397433 468 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RNA5SP390-201ENST00000410191 113 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 Y_RNA.604-201ENST00000410574 102 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 AC126124.2-201ENST00000413542 321 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 RPS15AP10-201ENST00000432472 382 ntBASIC2.73□□□□□ -1.97
LSM4Q9Y4Z0 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms