Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RN7SL354P-201ENST00000469282 294 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 MIR2052-201ENST00000636055 55 ntBASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM35Q9UPQ4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AL136360.1-201ENST00000503377 1900 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 Y_RNA.49-201ENST00000362714 112 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-799P-201ENST00000363567 107 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 SNORD113.2-201ENST00000364166 89 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-1141P-201ENST00000364520 107 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 Y_RNA.323-201ENST00000365157 109 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RNA5SP397-201ENST00000391323 118 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 MIR298-201ENST00000401212 88 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 MIR1263-201ENST00000408324 86 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-109P-201ENST00000516364 107 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 RNU6-184P-201ENST00000516514 107 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC026421.1-201ENST00000519101 163 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC015912.2-201ENST00000571053 181 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AL356575.1-201ENST00000603008 283 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC008745.1-201ENST00000604064 271 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 ARF4P1-201ENST00000605447 541 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 AP000346.3-201ENST00000622821 210 ntBASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TRIM35Q9UPQ4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 AC073073.2-201ENST00000609827 2578 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 Y_RNA.528-201ENST00000384575 108 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 MIR192-201ENST00000384915 110 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 MIR570-201ENST00000384917 97 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 RN7SKP267-201ENST00000410381 285 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 RNU2-50P-201ENST00000410494 143 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 RPL37P18-201ENST00000411602 243 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 AC073261.1-201ENST00000429409 121 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 RPS4XP2-201ENST00000458402 793 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 SCARNA10-201ENST00000459255 330 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 AC139453.2-201ENST00000487255 133 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 RMST_8.1-201ENST00000610287 165 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 AC116447.1-201ENST00000613153 453 ntBASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM35Q9UPQ4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM35Q9UPQ4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
TRIM35Q9UPQ4 SALL4P2-201ENST00000423288 2910 ntBASIC6.09□□□□□ -1.44
TRIM35Q9UPQ4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 RNU1-83P-201ENST00000363426 164 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 RNU2-68P-201ENST00000410878 191 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 AC012306.1-201ENST00000423267 114 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 MTATP8P2-201ENST00000435212 202 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 AC007969.2-201ENST00000441891 191 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 AC023424.1-201ENST00000496058 459 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 RNU6-107P-201ENST00000516643 102 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 IGKV1-22-201ENST00000524313 326 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 AC209154.1-201ENST00000582156 337 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 Y_RNA.818-201ENST00000618813 71 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 U3.53-201ENST00000628922 216 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 U6.99-201ENST00000637524 83 ntBASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM35Q9UPQ4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 Y_RNA.243-201ENST00000364481 109 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 SNORA18.3-201ENST00000384122 132 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 MIR549A-201ENST00000385268 96 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 RNU6-788P-201ENST00000390967 104 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 SNORA48.5-201ENST00000391143 135 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 RPS16P5-201ENST00000406501 404 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 RNU6-603P-201ENST00000411403 107 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 RPEP3-201ENST00000425462 676 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 AC078809.1-201ENST00000427601 140 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 HMGB1P37-201ENST00000439613 609 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 ATP5EP1-201ENST00000510257 156 ntBASIC6.07□□□□□ -1.44
TRIM35Q9UPQ4 SCARNA15.2-201ENST00000516409 127 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms