Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 RN7SL504P-201ENST00000494496 287 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC110794.1-201ENST00000505816 425 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-612P-201ENST00000516909 102 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 IGKV2-26-201ENST00000518305 343 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC022616.4-201ENST00000522985 181 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AL161670.1-201ENST00000554348 137 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC004584.2-201ENST00000570407 410 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 MIR5680-201ENST00000577577 84 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 PRR13P7-201ENST00000605538 430 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 SNORD58B-201ENST00000607313 66 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AP003355.3-201ENST00000623465 114 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 AC138627.2-201ENST00000624202 601 ntBASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNRF3Q9ULT6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 FTLP6-201ENST00000355274 422 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RNA5SP374-201ENST00000362939 125 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.152-201ENST00000363578 100 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.153-201ENST00000363615 91 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-72P-201ENST00000384285 79 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-658P-201ENST00000384606 106 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RNA5SP239-201ENST00000410218 129 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC004552.1-201ENST00000419089 348 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 HMGN2P30-201ENST00000423237 256 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 MTND3P9-201ENST00000429526 346 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC124916.1-201ENST00000444020 547 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RPL37P4-201ENST00000448908 268 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC006026.2-201ENST00000457376 180 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 RPS26P3-201ENST00000470205 348 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC090543.2-201ENST00000483963 348 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC004057.1-201ENST00000485827 348 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 TRBV12-2-201ENST00000489763 344 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC090281.1-201ENST00000523019 276 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC005476.1-201ENST00000554427 397 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AL158827.2-201ENST00000602494 330 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 U4.1-201ENST00000620349 87 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC007792.1-201ENST00000623023 402 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AL691447.3-201ENST00000635020 330 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 MIR4272-201ENST00000635924 64 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AL353743.1-202ENST00000431724 1695 ntBASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZNRF3Q9ULT6 AC058791.1-201ENST00000608412 3198 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-428P-201ENST00000362942 107 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 RNU4-42P-201ENST00000364738 142 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-217P-201ENST00000384164 104 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.510-201ENST00000384511 114 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 Y_RNA.574-201ENST00000384766 95 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-823P-201ENST00000391042 103 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 RNU6-700P-201ENST00000391043 107 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 U3.42-201ENST00000408746 214 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC007098.1-201ENST00000420122 367 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 TMEM167AP1-201ENST00000423409 219 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC011742.1-201ENST00000431448 434 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 HMGB1P12-201ENST00000438594 598 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC013470.1-201ENST00000453438 462 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC144568.1-201ENST00000520139 137 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 EIF4BP1-201ENST00000554881 351 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC016727.2-201ENST00000603988 621 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 AC124312.5-201ENST00000604451 268 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 FTX_3.1-201ENST00000610451 147 ntBASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZNRF3Q9ULT6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms