Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 MEMO1P3-201ENST00000459811 302 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 RPL37P6-201ENST00000460682 294 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 AC114981.1-201ENST00000503897 678 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 RN7SKP265-201ENST00000516448 223 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 RNU6-714P-201ENST00000516963 103 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 ACA59.2-201ENST00000517061 156 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 AP003122.4-201ENST00000530980 758 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 AP000763.2-201ENST00000540641 163 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 AF038458.1-201ENST00000588406 262 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 TUG1_2.1-201ENST00000614234 87 ntBASIC0.95□□□□□ -2.26
LRTM1Q9HBL6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 RNU4-41P-201ENST00000364426 143 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 RNU6-439P-201ENST00000384188 106 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 RNU1-139P-201ENST00000391307 165 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 MIR1262-201ENST00000408276 93 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 MTND1P21-201ENST00000412991 285 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 NCOR1P3-201ENST00000420479 303 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 CR848007.2-201ENST00000424918 787 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 CST2P1-201ENST00000425770 87 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 MTCO1P44-201ENST00000441935 243 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AL583843.1-201ENST00000456070 346 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 PRELID3BP1-201ENST00000457142 540 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 PTP4A1P4-201ENST00000512479 322 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 AL161798.1-201ENST00000604630 131 ntBASIC0.94□□□□□ -2.26
LRTM1Q9HBL6 RNU6-216P-201ENST00000363282 104 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RNU6-271P-201ENST00000363858 105 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RNU6-1280P-201ENST00000365211 107 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RNU6-883P-201ENST00000384597 107 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 SNORA48.1-201ENST00000390879 135 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RNA5SP100-201ENST00000410903 110 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RNA5SP59-201ENST00000410922 110 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 USP9YP26-201ENST00000421008 661 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 USP9YP18-201ENST00000425912 695 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AL135790.2-201ENST00000437701 267 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 USP9YP17-201ENST00000444617 696 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AL353718.1-201ENST00000451028 517 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 OR6C5P-201ENST00000452388 923 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 RPL30P7-201ENST00000479312 323 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 SNORA31.16-201ENST00000516773 139 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AC034229.4-201ENST00000607861 441 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 MIR6767-201ENST00000637302 66 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 AC092125.1-201ENST00000562568 1995 ntBASIC0.93□□□□□ -2.26
LRTM1Q9HBL6 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU6-97P-201ENST00000363387 104 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU6-481P-201ENST00000384194 107 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU6-1222P-201ENST00000384615 107 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 HMGN1P14-201ENST00000412459 517 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 GTF2IP3-201ENST00000433887 494 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AL022238.1-201ENST00000442557 355 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC020550.1-201ENST00000447385 163 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RPL7P55-201ENST00000450522 746 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 FABP5P15-201ENST00000453566 214 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RPS26P55-201ENST00000471178 356 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AP001025.1-201ENST00000486139 332 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC116655.1-201ENST00000508324 901 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 MTCYBP43-201ENST00000513621 740 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU7-40P-201ENST00000516397 64 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU5B-3P-201ENST00000516601 115 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RNU6-678P-201ENST00000516832 109 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 SNORA76.2-201ENST00000517095 137 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC138915.2-201ENST00000569776 97 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 RPL30P11-203ENST00000598995 310 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC243773.3-201ENST00000613270 256 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC016911.1-201ENST00000613297 452 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 AC090517.3-201ENST00000625170 141 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 MTND5P9-201ENST00000503854 1755 ntBASIC0.92□□□□□ -2.26
LRTM1Q9HBL6 MIR193B-201ENST00000384907 83 ntBASIC0.91□□□□□ -2.26
LRTM1Q9HBL6 AL158050.1-201ENST00000416077 457 ntBASIC0.91□□□□□ -2.26
LRTM1Q9HBL6 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.91□□□□□ -2.26
LRTM1Q9HBL6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.91□□□□□ -2.26
LRTM1Q9HBL6 RNU6-1183P-201ENST00000517054 60 ntBASIC0.91□□□□□ -2.26
LRTM1Q9HBL6 AC023632.1-201ENST00000518463 375 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms