Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 HSFY5P-201ENST00000453726 309 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 RN7SL274P-201ENST00000492268 272 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 RPL38P4-201ENST00000502376 214 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 MIR4648-201ENST00000580107 72 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 MIR548AC-201ENST00000585049 88 ntBASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LRRC40Q9H9A6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 SNORD14B-201ENST00000364533 90 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 RNU6-622P-201ENST00000384272 103 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 RNU6-1274P-201ENST00000384557 107 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 RNU2-20P-201ENST00000410425 191 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC114491.1-201ENST00000416095 246 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AL606662.1-201ENST00000445763 553 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AL590365.1-201ENST00000450788 243 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 snoU109.1-201ENST00000459339 135 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 PCMTD1P2-201ENST00000565017 355 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AL359999.1-201ENST00000604513 294 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AL670379.2-201ENST00000604983 252 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AL670379.4-201ENST00000605279 254 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC105129.3-201ENST00000605455 485 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC092192.1-201ENST00000633154 1018 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 AC103710.2-202ENST00000641454 2853 ntBASIC1.92□□□□□ -2.1
LRRC40Q9H9A6 RNU6-501P-201ENST00000364072 100 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 RNU6-546P-201ENST00000383991 107 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 RNU6-1179P-201ENST00000384667 107 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 CISD1P1-201ENST00000393907 327 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL030996.1-201ENST00000411430 235 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC098592.1-201ENST00000419352 333 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 MTCO3P5-201ENST00000433620 714 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC104058.1-201ENST00000448028 297 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL121594.1-201ENST00000475906 575 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AP001025.1-201ENST00000486139 332 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC010587.1-201ENST00000505809 469 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 RNU6-123P-201ENST00000516163 102 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AP003392.2-201ENST00000527269 208 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 CLIC4P2-201ENST00000601934 717 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 RNU6-87P-201ENST00000607561 108 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC012409.4-201ENST00000612923 249 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 AC110994.2-201ENST00000635481 492 ntBASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.91□□□□□ -2.1
LRRC40Q9H9A6 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
LRRC40Q9H9A6 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 MRPL42P2-201ENST00000403169 426 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 RNU6-584P-201ENST00000410350 95 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 RNU2-48P-201ENST00000410694 191 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AL365400.1-201ENST00000431854 640 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC108078.2-201ENST00000510750 236 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 RNU2-44P-201ENST00000516795 194 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 SNORA31.23-201ENST00000517219 133 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AP005639.2-201ENST00000527592 928 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AP003181.2-201ENST00000528941 181 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 DUXAP5-201ENST00000529668 529 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AL139286.2-201ENST00000606838 396 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC012360.2-201ENST00000609349 391 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AC004908.3-201ENST00000610248 625 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 AL359314.1-201ENST00000616913 261 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 SCARNA4-202ENST00000625402 129 ntBASIC1.9□□□□□ -2.11
LRRC40Q9H9A6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms