Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF39Q9H2S5 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 SDAD1P1-202ENST00000524156 2051 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 MIR195-201ENST00000385194 87 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 SNORD77.2-201ENST00000391045 68 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 MIR1183-201ENST00000408856 89 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 HMGA1P8-201ENST00000414130 321 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 RNF10P1-201ENST00000418589 369 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 AL035690.1-201ENST00000490892 383 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 SNORA31.4-201ENST00000516049 129 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 AL161713.1-201ENST00000555538 145 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 MIR4505-201ENST00000582238 73 ntBASIC6.32□□□□□ -1.4
RNF39Q9H2S5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
RNF39Q9H2S5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 snoU2_19.1-201ENST00000362361 80 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 RNA5SP46-201ENST00000362370 120 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 SNORA8.1-201ENST00000384250 140 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 FTH1P12-201ENST00000432137 551 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 RNU6-948P-201ENST00000516374 107 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 SCARNA3-201ENST00000517097 143 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 MIR4512-201ENST00000583257 77 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 AC006116.3-201ENST00000592968 361 ntBASIC6.31□□□□□ -1.4
RNF39Q9H2S5 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF39Q9H2S5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC063976.2-201ENST00000425667 3556 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC009779.8-201ENST00000641684 4384 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 U3.3-201ENST00000362986 216 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 RNU6-1210P-201ENST00000363775 107 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 RNU6-895P-201ENST00000384125 103 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC016909.1-201ENST00000415916 166 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 BMS1P17-202ENST00000416720 316 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 RPS26P39-201ENST00000469206 341 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC073073.1-201ENST00000493920 463 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 RNU6-1282P-201ENST00000516735 96 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC021678.3-201ENST00000517893 476 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 MIR4489-201ENST00000578869 62 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC069200.1-201ENST00000609511 323 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AC241584.2-201ENST00000637142 2090 ntBASIC6.3□□□□□ -1.4
RNF39Q9H2S5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
RNF39Q9H2S5 AL117339.4-201ENST00000608335 7063 ntBASIC6.29□□□□□ -1.4
RNF39Q9H2S5 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 RNU6-268P-201ENST00000364174 107 ntBASIC6.29□□□□□ -1.4
RNF39Q9H2S5 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.29□□□□□ -1.4
RNF39Q9H2S5 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms