Protein–RNA interactions for Protein: Q9H0W8

SMG9, Protein SMG9, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9Q9H0W8 AL391261.3-201ENST00000557194 520 ntBASIC4.42□□□□□ -1.7
SMG9Q9H0W8 MIR5692C2-201ENST00000577959 77 ntBASIC4.42□□□□□ -1.7
SMG9Q9H0W8 AC005828.6-201ENST00000606610 232 ntBASIC4.42□□□□□ -1.7
SMG9Q9H0W8 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
SMG9Q9H0W8 U6.99-201ENST00000637524 83 ntBASIC4.42□□□□□ -1.7
SMG9Q9H0W8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SMG9Q9H0W8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RNU5B-2P-201ENST00000363036 113 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RNU6-137P-201ENST00000363680 108 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 SNORA22C-201ENST00000384614 134 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 Y_RNA.568-201ENST00000384742 113 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RNU6-1168P-201ENST00000390831 104 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RNU6-159P-201ENST00000391080 106 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 RNU6-131P-201ENST00000391144 107 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 MIR921-201ENST00000401133 56 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 MIR1911-201ENST00000410783 80 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC009237.7-201ENST00000447357 229 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC006026.2-201ENST00000457376 180 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AP004607.1-201ENST00000524456 203 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC016256.1-201ENST00000547971 354 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 TRAV28-201ENST00000557548 323 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 UBL5P4-201ENST00000562584 236 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 CYCSP39-201ENST00000565821 309 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 ZNF192P1-203ENST00000565888 810 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AC136601.2-201ENST00000604356 474 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 AP002826.1-201ENST00000608835 315 ntBASIC4.41□□□□□ -1.7
SMG9Q9H0W8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SMG9Q9H0W8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.4□□□□□ -1.7
SMG9Q9H0W8 AL133243.3-201ENST00000617415 3004 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 RNU6-653P-201ENST00000363074 106 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 RNU1-20P-201ENST00000363314 162 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 RNU6-213P-201ENST00000384051 104 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 MIR23B-201ENST00000384832 97 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 HLFP1-201ENST00000402375 499 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 SNORA74C-2-201ENST00000411179 201 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AL162725.1-201ENST00000435405 301 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 SNRPEP9-201ENST00000436794 238 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 RPS29P7-201ENST00000439662 171 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC010285.1-201ENST00000470580 392 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AL592156.1-201ENST00000508758 304 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC023632.4-201ENST00000517783 191 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC006130.2-201ENST00000586202 326 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC084757.4-201ENST00000616350 526 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 SNORA43.4-201ENST00000629559 138 ntBASIC4.4□□□□□ -1.71
SMG9Q9H0W8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SMG9Q9H0W8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 SNORD32A-201ENST00000364805 84 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 Y_RNA.400-201ENST00000383963 111 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 AL357139.1-201ENST00000407792 426 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 AC024067.1-201ENST00000426199 223 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 RPL23AP95-201ENST00000426806 265 ntBASIC4.39□□□□□ -1.71
SMG9Q9H0W8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.39□□□□□ -1.71
SMG9Q9H0W8 UBE2CP3-201ENST00000502715 450 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms