Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 HMGB1P37-201ENST00000439613 609 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AP000873.1-201ENST00000463987 400 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 RN7SL542P-201ENST00000467147 294 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC010285.1-201ENST00000470580 392 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC098869.1-201ENST00000481627 292 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 GZMAP1-201ENST00000503054 631 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 Vault.1-201ENST00000516474 102 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.700-201ENST00000516806 100 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC005476.1-201ENST00000554427 397 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC009779.6-201ENST00000603972 165 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC012531.5-201ENST00000611375 151 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 AC090132.2-201ENST00000615881 347 ntBASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXP3Q9BZS1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 U3.13-201ENST00000364804 214 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 RNU6-166P-201ENST00000384371 107 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MIR554-201ENST00000384874 96 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MIR190B-201ENST00000401119 79 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MIR1290-201ENST00000408735 78 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 RN7SKP202-201ENST00000410439 330 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC017083.1-201ENST00000428093 483 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MTND5P15-201ENST00000434246 349 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 SNORA31.6-201ENST00000516241 130 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 SNORA31.19-201ENST00000517079 126 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AL442163.3-201ENST00000554110 156 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC104581.2-201ENST00000572227 430 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC025627.2-201ENST00000576220 160 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 MIR4286-201ENST00000580651 93 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 SNRPGP15-201ENST00000600149 222 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AC073410.2-201ENST00000603240 332 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AL591424.2-201ENST00000617023 128 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 Z82217.1-201ENST00000625157 8149 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 AL359693.1-201ENST00000614959 2407 ntBASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXP3Q9BZS1 RNU6-227P-201ENST00000362865 103 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RNU6-428P-201ENST00000362942 107 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RNU1-18P-201ENST00000363062 164 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.539-201ENST00000384635 107 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 MIR34A-201ENST00000385130 110 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 SNORA12.2-201ENST00000391040 156 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 AC096920.1-201ENST00000423991 241 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RPL27AP8-201ENST00000424277 446 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 MTCO3P29-201ENST00000432119 779 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RPS29P7-201ENST00000439662 171 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 snoU13.24-201ENST00000458998 104 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 AC034236.1-201ENST00000469891 373 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RNU6-182P-201ENST00000516970 105 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 RRN3P3-201ENST00000549207 578 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 MIR7151-201ENST00000617477 60 ntBASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXP3Q9BZS1 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 SNORD27-201ENST00000363981 72 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 SNORA62.3-201ENST00000365110 153 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RNA5SP167-201ENST00000365461 116 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RNU6-741P-201ENST00000383889 107 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPL21P75-201ENST00000396599 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPL21P28-201ENST00000401418 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPS29P13-201ENST00000402041 169 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RNU2-71P-201ENST00000411395 189 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 TOMM22P1-201ENST00000418578 312 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AL590556.1-201ENST00000423231 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPL21P11-201ENST00000461458 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPL21P39-201ENST00000463605 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC087190.1-201ENST00000484462 480 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC107032.1-201ENST00000485945 480 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC132942.1-201ENST00000486753 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC093591.1-201ENST00000491435 481 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RPL21P16-201ENST00000495531 483 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 AC010469.2-201ENST00000496412 480 ntBASIC4.09□□□□□ -1.75
FOXP3Q9BZS1 RNU5B-3P-201ENST00000516601 115 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms