Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CYCSP48-201ENST00000417124 323 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AC027124.2-201ENST00000428249 105 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AZGP1P2-201ENST00000454506 345 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 SNORD33.1-201ENST00000516213 88 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 NDUFA5P6-201ENST00000542110 379 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 MIR5582-201ENST00000579697 68 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USB1Q9BQ65 AL034555.1-201ENST00000604816 211 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AL670379.3-201ENST00000605040 251 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AC211433.2-201ENST00000608433 387 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AL139124.1-201ENST00000609123 421 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 PCGEM1.1-201ENST00000613431 131 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USB1Q9BQ65 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 AC006206.1-201ENST00000544842 3387 ntBASIC4.75□□□□□ -1.65
USB1Q9BQ65 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USB1Q9BQ65 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.75□□□□□ -1.65
USB1Q9BQ65 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 FAM35BP-202ENST00000497389 3337 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 SNORA7.2-201ENST00000364446 145 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 U3.15-201ENST00000365398 212 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 Y_RNA.361-201ENST00000365515 120 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 RNA5SP504-201ENST00000410676 117 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 EIF4HP2-201ENST00000424380 563 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC108075.1-201ENST00000424692 529 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AIMP1P2-201ENST00000425294 312 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AL365496.1-201ENST00000426885 215 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC068287.1-201ENST00000430283 295 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 Z75741.1-201ENST00000446793 314 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 SNORA70.12-201ENST00000516084 153 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 Y_RNA.692-201ENST00000516627 105 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 AL031274.2-201ENST00000599419 203 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC120024.3-201ENST00000603167 156 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 AC025754.2-201ENST00000606491 432 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 CR381572.2-201ENST00000624852 397 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 AP001273.1-201ENST00000624493 3152 ntBASIC4.74□□□□□ -1.65
USB1Q9BQ65 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.74□□□□□ -1.65
USB1Q9BQ65 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USB1Q9BQ65 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USB1Q9BQ65 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USB1Q9BQ65 MIR133B-201ENST00000362210 119 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 RNU1-19P-201ENST00000363306 165 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 SNORD56.6-201ENST00000384569 71 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 RNU1-77P-201ENST00000390868 162 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 HSPE1P21-201ENST00000438283 308 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 HMGN2P21-201ENST00000447764 270 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC146944.2-203ENST00000502493 354 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC139495.1-202ENST00000513164 354 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC027308.1-201ENST00000517993 110 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC133485.4-201ENST00000561835 220 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC105137.2-201ENST00000569073 466 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC138907.4-201ENST00000570107 226 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 MIR5006-201ENST00000583027 110 ntBASIC4.73□□□□□ -1.65
USB1Q9BQ65 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USB1Q9BQ65 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.73□□□□□ -1.65
USB1Q9BQ65 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USB1Q9BQ65 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USB1Q9BQ65 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USB1Q9BQ65 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms