Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC130454.1-201ENST00000622948 401 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.72□□□□□ -1.81
CHFRQ96EP1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHFRQ96EP1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CHFRQ96EP1 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.72□□□□□ -1.81
CHFRQ96EP1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.71□□□□□ -1.81
CHFRQ96EP1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU6-629P-201ENST00000384061 103 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU6-190P-201ENST00000384154 102 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU6-393P-201ENST00000384475 107 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU6-493P-201ENST00000391321 108 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNA5SP56-201ENST00000410277 118 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU6-1156P-201ENST00000410365 100 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNA5SP107-201ENST00000411358 122 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC017079.2-201ENST00000416102 485 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC005326.1-201ENST00000429197 123 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 MTCO3P29-201ENST00000432119 779 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC004383.1-201ENST00000438135 289 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 CYCSP32-201ENST00000440548 321 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AL353691.1-201ENST00000451332 387 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RNU7-187P-201ENST00000458985 68 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 RPL21P10-201ENST00000463521 490 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC025518.1-201ENST00000479856 347 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC098869.1-201ENST00000481627 292 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC092436.3-201ENST00000511788 257 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 SNORA40.15-201ENST00000516884 107 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 RPL23AP84-201ENST00000571193 464 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 MIR548AI-201ENST00000579940 88 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 AC005000.2-201ENST00000605468 310 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CHFRQ96EP1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 IPO8P1-201ENST00000455509 3109 ntBASIC3.71□□□□□ -1.82
CHFRQ96EP1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CHFRQ96EP1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
CHFRQ96EP1 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 Y_RNA.577-201ENST00000384794 101 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AL138885.1-201ENST00000405921 675 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 MIR548H3-201ENST00000408771 118 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 RNU6-1140P-201ENST00000410517 106 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AL139156.1-201ENST00000412785 841 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 BX276092.3-201ENST00000424182 230 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 EIF1P2-201ENST00000428233 350 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC005094.1-201ENST00000440420 368 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 TMSB4XP3-201ENST00000445144 114 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 OR2AQ1P-201ENST00000451972 200 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 RN7SL601P-201ENST00000471221 293 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 RPL17P19-201ENST00000489069 552 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 TRBV12-2-201ENST00000489763 344 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 RN7SKP57-201ENST00000517248 293 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC025423.5-201ENST00000550230 219 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC006600.1-201ENST00000572529 153 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC006557.5-201ENST00000603126 811 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AL590099.1-201ENST00000615276 138 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AL138825.1-201ENST00000618587 192 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC244205.2-202ENST00000635781 342 ntBASIC3.7□□□□□ -1.82
CHFRQ96EP1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CHFRQ96EP1 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CHFRQ96EP1 AC005183.1-201ENST00000603687 1979 ntBASIC3.69□□□□□ -1.82
CHFRQ96EP1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.69□□□□□ -1.82
CHFRQ96EP1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms