Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.27-201ENST00000362540 103 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 RNU6-102P-201ENST00000384485 104 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.581-201ENST00000391017 97 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 SNRPEP9-201ENST00000436794 238 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 MRPS18CP4-201ENST00000535821 231 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 AC011921.3-201ENST00000605540 361 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 U6.106-201ENST00000636360 105 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 U6.92-201ENST00000636464 89 ntBASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TMEM40Q8WWA1 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 ZNF299P-201ENST00000406845 1804 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 RNA5SP189-201ENST00000364920 115 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 RNU6-417P-201ENST00000384712 107 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 MIR493-201ENST00000385254 89 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 RNU6-700P-201ENST00000391043 107 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 HDGFP1-201ENST00000405943 252 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 RNA5SP494-201ENST00000410653 129 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 AC098614.2-201ENST00000426040 255 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 SEPT14P8-201ENST00000508026 178 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 CYCSP30-201ENST00000546447 172 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 AC136601.2-201ENST00000604356 474 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 MIR8076-201ENST00000611401 83 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 MIR6075-201ENST00000620782 95 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 AC018529.3-201ENST00000624212 2254 ntBASIC4.32□□□□□ -1.72
TMEM40Q8WWA1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 SNORD113-8-201ENST00000363497 74 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 RNU5E-7P-201ENST00000365290 117 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 U1.1-201ENST00000384101 164 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 MIR325-201ENST00000385260 98 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 RNU6-1168P-201ENST00000390831 104 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 RNU6-651P-201ENST00000411040 105 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 RNU6-1135P-201ENST00000411083 103 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 VDAC1P3-201ENST00000434069 851 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AP000873.1-201ENST00000463987 400 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 RPL31P13-201ENST00000484151 370 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 MRPL42P6-201ENST00000486397 371 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC005921.1-201ENST00000510589 286 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 U6.99-201ENST00000637524 83 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 MTND5P9-201ENST00000503854 1755 ntBASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TMEM40Q8WWA1 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 AL109809.4-201ENST00000603520 2185 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNU6-595P-201ENST00000363944 107 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.292-201ENST00000364904 97 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNA5SP167-201ENST00000365461 116 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 Y_RNA.418-201ENST00000384029 102 ntBASIC4.3□□□□□ -1.72
TMEM40Q8WWA1 RNU6-44P-201ENST00000384045 107 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms