Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 RNU7-140P-201ENST00000459546 60 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 RPS29P21-201ENST00000496272 170 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 PDCD5P2-201ENST00000507570 312 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 RNA5SP437-201ENST00000517249 129 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 MIR5094-201ENST00000578766 85 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 AL365434.2-201ENST00000607979 234 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 U6.99-201ENST00000637524 83 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 MIR1322-201ENST00000638013 71 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-898P-201ENST00000365627 104 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 SNORA17.3-201ENST00000391159 129 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 CBX3P9-201ENST00000402326 552 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 FTH1P15-201ENST00000406984 280 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 TPMTP2-201ENST00000414372 726 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 RPL21P111-201ENST00000418453 477 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 RAP1BP2-201ENST00000478270 544 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-991P-201ENST00000516168 107 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP503-201ENST00000517047 117 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 MIR4782-201ENST00000577987 79 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC022432.1-201ENST00000595739 310 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC108706.1-201ENST00000611053 297 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.34□□□□□ -2.36
SPTSSBQ8NFR3 MTND4P16-201ENST00000466108 1367 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-743P-201ENST00000364151 106 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-512P-201ENST00000364438 103 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 SNORA70B-201ENST00000384210 135 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 MIR520A-201ENST00000384862 85 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 MIR29B2-201ENST00000385055 81 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 MIR605-201ENST00000385078 83 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 BX119904.4-201ENST00000424402 301 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 HMGB3P12-201ENST00000438745 556 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 HSPE1P13-201ENST00000451143 297 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 RPS27AP8-201ENST00000452665 445 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 AL157398.1-201ENST00000452981 186 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-333P-201ENST00000459117 107 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 snoU13.14-201ENST00000459372 104 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 SNORD124-201ENST00000459577 104 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 BET1P1-201ENST00000482276 359 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 AC116337.1-201ENST00000509680 687 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 SNORA31.3-201ENST00000516029 96 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 CBX3P8-201ENST00000532412 525 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 BNIP3P10-201ENST00000605360 577 ntBASIC0.33□□□□□ -2.36
SPTSSBQ8NFR3 LINC02555-201ENST00000563933 1951 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-655P-201ENST00000362858 107 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-343P-201ENST00000364709 104 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-487P-201ENST00000365430 104 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 EBAG9P1-201ENST00000418955 543 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC083875.1-201ENST00000419509 405 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 MTCYBP15-201ENST00000433123 1127 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC092427.1-201ENST00000439177 601 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RPS27P22-201ENST00000478056 241 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC117454.1-201ENST00000491120 168 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC074344.1-201ENST00000512823 224 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNA5SP168-201ENST00000516642 112 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-548P-201ENST00000517083 115 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 SNORA70.22-201ENST00000517160 124 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 RNU6-165P-201ENST00000517170 99 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC009902.1-201ENST00000519351 183 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC126365.2-201ENST00000580630 379 ntBASIC0.32□□□□□ -2.36
SPTSSBQ8NFR3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms