Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 RNU7-95P-201ENST00000459222 64 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 RNU6-572P-201ENST00000516724 80 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AP006587.4-201ENST00000526053 529 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AP003392.2-201ENST00000527269 208 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 DNAJC19P9-201ENST00000555084 351 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC019288.1-201ENST00000557918 224 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 MTND3P13-201ENST00000574391 343 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 BNIP3P9-201ENST00000603714 553 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 CYP2C61P-201ENST00000604072 290 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC098614.4-201ENST00000607601 462 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 AC123767.1-202ENST00000620407 817 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.04□□□□□ -2.24
ZNF439Q8NDP4 Y_RNA.110-201ENST00000363220 99 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RNU6-288P-201ENST00000363690 104 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RNU6-1274P-201ENST00000384557 107 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RNU6-278P-201ENST00000390945 109 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RN7SKP266-201ENST00000410232 287 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC104058.1-201ENST00000448028 297 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 snoU13.9-201ENST00000458927 103 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 MTND1P16-201ENST00000465177 898 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC132942.1-201ENST00000486753 483 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 MTCYBP43-201ENST00000513621 740 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RNA5SP216-201ENST00000516111 123 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RNU6-902P-201ENST00000517212 91 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC109329.1-201ENST00000518744 317 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 RRN3P3-201ENST00000549207 578 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC006270.3-201ENST00000605967 1036 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 Z82243.1-201ENST00000609432 473 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 AC126544.2-201ENST00000625174 749 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.03□□□□□ -2.24
ZNF439Q8NDP4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.25
ZNF439Q8NDP4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RNU1-58P-201ENST00000362413 163 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RNU6-1010P-201ENST00000362757 107 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RNU6-271P-201ENST00000363858 105 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RNU6-611P-201ENST00000384276 104 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 MIR301A-201ENST00000385261 86 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 USP9YP33-201ENST00000412220 421 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AL022400.1-201ENST00000423946 935 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC108667.1-201ENST00000428618 249 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC079448.1-201ENST00000449377 373 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC009474.2-201ENST00000451383 136 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC108729.1-201ENST00000487812 947 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RPS3AP22-201ENST00000488297 769 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 SNORA31.19-201ENST00000517079 126 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 RPL21P5-201ENST00000554662 472 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC005668.1-201ENST00000571142 476 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC073410.2-201ENST00000603240 332 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AL358072.1-201ENST00000604156 575 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AL022345.1-201ENST00000607292 135 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AC245297.2-201ENST00000610119 565 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 AL136313.1-201ENST00000624804 202 ntBASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
ZNF439Q8NDP4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 SNORA40C-201ENST00000391285 128 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 RNU2-32P-201ENST00000411193 191 ntBASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.01□□□□□ -2.25
ZNF439Q8NDP4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 247.6 ms