Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC010620.2-201ENST00000600135 313 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MIR6867-201ENST00000610636 67 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MIR6134-201ENST00000617606 109 ntBASIC4.81□□□□□ -1.64
TRIM50Q86XT4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM50Q86XT4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AC135776.4-201ENST00000624300 1904 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 U8.10-201ENST00000384260 133 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 FTH1P15-201ENST00000406984 280 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 RNA5SP129-201ENST00000410276 118 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 Y_RNA.626-201ENST00000411288 95 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 COX6CP10-201ENST00000416832 224 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AC007969.2-201ENST00000441891 191 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 GPM6BP3-201ENST00000442797 145 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 MRPL42P6-201ENST00000486397 371 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AC097462.2-201ENST00000504623 481 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 SNORD116-28-201ENST00000516123 91 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 RN7SKP49-201ENST00000516675 260 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 MIR2116-201ENST00000517221 80 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AC106785.1-201ENST00000565935 262 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 MIR1254-2-201ENST00000579553 63 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AL162424.1-201ENST00000602325 221 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AC012468.1-201ENST00000604888 430 ntBASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM50Q86XT4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 SNORA25.1-201ENST00000362326 128 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 RNA5SP307-201ENST00000362863 116 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 HLFP1-201ENST00000402375 499 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 SNORA74C-2-201ENST00000411179 201 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 RPL26P26-201ENST00000480251 434 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 AL356157.2-201ENST00000605122 111 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 AC010300.1-201ENST00000600671 5134 ntBASIC4.79□□□□□ -1.64
TRIM50Q86XT4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM50Q86XT4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RNU6-626P-201ENST00000363354 107 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RNA5SP130-201ENST00000364431 114 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RNU6-514P-201ENST00000384208 107 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RNU6-281P-201ENST00000384212 103 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 SNORA36A-201ENST00000384221 132 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 SNORD96B-201ENST00000386148 79 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AL356095.1-201ENST00000417217 199 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AC117440.1-201ENST00000474107 571 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RPS4XP22-201ENST00000480755 780 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AC005921.1-201ENST00000510589 286 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 Y_RNA.679-201ENST00000516416 91 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RNU6-567P-201ENST00000516746 107 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AK6P2-201ENST00000549020 471 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 CR383656.8-201ENST00000549046 145 ntBASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TRIM50Q86XT4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM50Q86XT4 AC068254.2-201ENST00000623938 3577 ntBASIC4.77□□□□□ -1.65
TRIM50Q86XT4 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM50Q86XT4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TRIM50Q86XT4 Y_RNA.292-201ENST00000364904 97 ntBASIC4.77□□□□□ -1.65
TRIM50Q86XT4 RNA5SP189-201ENST00000364920 115 ntBASIC4.77□□□□□ -1.65
TRIM50Q86XT4 RNU6-1280P-201ENST00000365211 107 ntBASIC4.77□□□□□ -1.65
TRIM50Q86XT4 RNY4P28-201ENST00000365281 93 ntBASIC4.77□□□□□ -1.65
TRIM50Q86XT4 RNA5SP283-201ENST00000365604 119 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms