Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC055872.1-201ENST00000570978 278 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 MIR4782-201ENST00000577987 79 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 MIR3145-201ENST00000580727 82 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 U4.7-201ENST00000638126 106 ntBASIC3.93□□□□□ -1.78
ATG4DQ86TL0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4DQ86TL0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AC009229.4-201ENST00000623854 1947 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RNU4-80P-201ENST00000363200 141 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RNA5SP175-201ENST00000364275 119 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 SNORA70.2-201ENST00000364506 135 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RNU4-11P-201ENST00000365287 132 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 MIR153-2-201ENST00000385225 87 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RNU6-239P-201ENST00000390990 99 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AC011998.1-201ENST00000433403 117 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 Z82210.1-201ENST00000440037 231 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 HSPE1P6-201ENST00000479457 291 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AF186996.7-201ENST00000492781 209 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RPL23AP49-201ENST00000492925 468 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RNU6-966P-201ENST00000516479 104 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 PARP1P2-201ENST00000556806 195 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AL391261.3-201ENST00000557194 520 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AC113403.1-201ENST00000604910 193 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 ARF4P1-201ENST00000605447 541 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AL008718.3-201ENST00000610217 321 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AC004825.2-201ENST00000616634 455 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 AL353748.2-201ENST00000622148 471 ntBASIC3.92□□□□□ -1.78
ATG4DQ86TL0 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ATG4DQ86TL0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 SNORD115-32-201ENST00000364079 82 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 Y_RNA.230-201ENST00000364348 109 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 RNA5SP479-201ENST00000364858 117 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 RNU6-541P-201ENST00000384709 110 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC007560.1-201ENST00000426912 237 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 RN7SL98P-201ENST00000462271 300 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 PPIAP21-201ENST00000464473 501 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC010618.1-201ENST00000469924 477 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC139453.3-201ENST00000493276 369 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC108145.1-201ENST00000503770 153 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC010265.1-201ENST00000513509 211 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 RNU6-191P-201ENST00000516295 94 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC006064.5-201ENST00000541782 248 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 RN7SL176P-201ENST00000580352 264 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC090616.3-201ENST00000582184 217 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 MIR3939-201ENST00000582614 106 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC005176.2-201ENST00000596933 147 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC114781.5-201ENST00000615297 108 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC068831.7-201ENST00000616954 363 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC140479.6-201ENST00000633535 357 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AC009812.4-201ENST00000569134 1805 ntBASIC3.91□□□□□ -1.78
ATG4DQ86TL0 AL133412.1-201ENST00000380194 2992 ntBASIC3.9□□□□□ -1.78
ATG4DQ86TL0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.9□□□□□ -1.78
ATG4DQ86TL0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATG4DQ86TL0 RNU6-281P-201ENST00000384212 103 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 MIR487A-201ENST00000385009 80 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 MIR10B-201ENST00000385011 110 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 MIR329-1-201ENST00000385028 80 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 MIR34A-201ENST00000385130 110 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 RPL30P13-201ENST00000418873 348 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 BTF3P11-201ENST00000426582 477 ntBASIC3.9□□□□□ -1.79
ATG4DQ86TL0 HLA-N-201ENST00000437516 135 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms