Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL713922.2-201ENST00000619384 716 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 AC027309.3-201ENST00000623419 351 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.97□□□□□ -1.77
E4F1Q66K89 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
E4F1Q66K89 AC068647.1-201ENST00000489539 2265 ntBASIC3.97□□□□□ -1.77
E4F1Q66K89 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
E4F1Q66K89 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
E4F1Q66K89 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
E4F1Q66K89 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
E4F1Q66K89 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
E4F1Q66K89 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.96□□□□□ -1.77
E4F1Q66K89 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
E4F1Q66K89 AC032011.1-201ENST00000611703 1549 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.96□□□□□ -1.78
E4F1Q66K89 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.96□□□□□ -1.78
E4F1Q66K89 RNU6-336P-201ENST00000364891 107 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 SNORA63.7-201ENST00000365579 123 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 DEFB109C-201ENST00000382575 264 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 DEFB109B-201ENST00000382656 264 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 Y_RNA.556-201ENST00000384677 113 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
E4F1Q66K89 RNA5SP494-201ENST00000410653 129 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC009220.1-201ENST00000451614 275 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 NUTF2P7-201ENST00000453086 375 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.96□□□□□ -1.78
E4F1Q66K89 AC013470.1-201ENST00000453438 462 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.96□□□□□ -1.78
E4F1Q66K89 RNA5SP468-201ENST00000516782 93 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 CASP1P1-201ENST00000526345 212 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC010186.2-204ENST00000537668 439 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.96□□□□□ -1.78
E4F1Q66K89 H3F3AP1-201ENST00000559984 334 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.96□□□□□ -1.78
E4F1Q66K89 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.96□□□□□ -1.78
E4F1Q66K89 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.96□□□□□ -1.78
E4F1Q66K89 MTND4LP5-201ENST00000605152 292 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC006023.2-201ENST00000609916 167 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC009318.2-201ENST00000610917 651 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 AC022149.2-201ENST00000621061 203 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
E4F1Q66K89 SCARNA4-202ENST00000625402 129 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 U4.7-201ENST00000638126 106 ntBASIC3.96□□□□□ -1.78
E4F1Q66K89 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
E4F1Q66K89 SNORA31-201ENST00000362607 130 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 SNORD50.1-201ENST00000362987 71 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 Y_RNA.123-201ENST00000363338 102 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 Y_RNA.476-201ENST00000384347 108 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
E4F1Q66K89 SNORA69.1-201ENST00000390904 137 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 SNORA11B-201ENST00000408175 129 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 AC017079.2-201ENST00000416102 485 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.95□□□□□ -1.78
E4F1Q66K89 USP9YP16-201ENST00000430287 407 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 USP9YP23-201ENST00000455085 407 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.95□□□□□ -1.78
E4F1Q66K89 UBE2CP3-201ENST00000502715 450 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 RNU1-103P-201ENST00000516502 125 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 RNU6-1183P-201ENST00000517054 60 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
E4F1Q66K89 OR5D17P-201ENST00000531492 978 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.95□□□□□ -1.78
E4F1Q66K89 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.95□□□□□ -1.78
E4F1Q66K89 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.95□□□□□ -1.78
E4F1Q66K89 MIR5701-3-201ENST00000578890 82 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 MIR5701-1-201ENST00000585138 82 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 AC005046.1-201ENST00000608515 625 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 MIR378J-201ENST00000611988 109 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.95□□□□□ -1.78
E4F1Q66K89 MIR5701-2-201ENST00000615634 82 ntBASIC3.95□□□□□ -1.78
E4F1Q66K89 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
E4F1Q66K89 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
E4F1Q66K89 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
E4F1Q66K89 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
E4F1Q66K89 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
E4F1Q66K89 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU6-227P-201ENST00000362865 103 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU6-527P-201ENST00000363425 104 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU6-898P-201ENST00000365627 104 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 MT-TG-201ENST00000387429 68 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU6-907P-201ENST00000390924 102 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 SAR1AP2-201ENST00000392696 594 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
E4F1Q66K89 RNA5SP31-201ENST00000411144 127 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.94□□□□□ -1.78
E4F1Q66K89 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.94□□□□□ -1.78
E4F1Q66K89 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
E4F1Q66K89 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.94□□□□□ -1.78
E4F1Q66K89 AC006539.3-201ENST00000454258 129 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RN7SL442P-201ENST00000473804 320 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU6-397P-201ENST00000516226 104 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RNU2-58P-201ENST00000516403 183 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 MIR2276-201ENST00000516886 89 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 CYCSP39-201ENST00000565821 309 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 MIR3690-201ENST00000580266 75 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 RPS29P30-201ENST00000600975 111 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 AL606490.9-201ENST00000603331 271 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 AC008962.1-201ENST00000605729 304 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 FTX_3.1-201ENST00000610451 147 ntBASIC3.94□□□□□ -1.78
E4F1Q66K89 AC092628.2-201ENST00000622492 339 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms