Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNU6-1328P-201ENST00000410938 106 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 RNU6-272P-201ENST00000411028 104 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AL034418.1-201ENST00000448675 860 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 VPS26AP1-201ENST00000483197 979 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 RNVU1-2-201ENST00000516326 135 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AC104417.1-201ENST00000523974 751 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AC093023.1-201ENST00000547375 507 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 MIR3126-201ENST00000577443 74 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AL713866.2-201ENST00000603579 219 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AC011155.2-201ENST00000623202 216 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 SNORA40.19-201ENST00000390846 128 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 RNY4-201ENST00000516507 96 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 RNA5SP404-201ENST00000517118 132 ntBASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.08□□□□□ -2.4
RIF1Q5UIP0 MIR635-201ENST00000384830 98 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC009310.1-201ENST00000414414 451 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 PTGES3P4-201ENST00000426243 356 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC023347.2-201ENST00000433994 462 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 SCARNA16.5-201ENST00000517114 183 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RNU6-902P-201ENST00000517212 91 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AL136520.1-202ENST00000555494 763 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC090888.1-201ENST00000561335 1141 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AL590410.1-201ENST00000617925 333 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC023934.1-201ENST00000574529 2389 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RNU6-674P-201ENST00000363831 107 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RNU6-1207P-201ENST00000384343 107 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RNU6-748P-201ENST00000384648 107 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 MIR506-201ENST00000384998 124 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 MIR30A-201ENST00000385092 71 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RNFT1P2-201ENST00000443064 757 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 SNORD126-201ENST00000459475 77 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC007751.1-201ENST00000529260 376 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AP003066.2-201ENST00000529375 555 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 LARP7P1-201ENST00000605576 316 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC098614.4-201ENST00000607601 462 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 PART1_2.1-201ENST00000612397 250 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AL591926.4-201ENST00000616895 298 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 MIR8065-201ENST00000620577 100 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 RMST_7.1-201ENST00000621935 268 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC093648.1-201ENST00000623546 606 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 AC091912.2-201ENST00000624798 167 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 MTND4P16-201ENST00000466108 1367 ntBASIC0.07□□□□□ -2.4
RIF1Q5UIP0 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.07□□□□□ -2.4
RIF1Q5UIP0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC134026.1-201ENST00000623249 2239 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 SNORD44.1-201ENST00000363202 61 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 Y_RNA.246-201ENST00000364495 108 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC069282.1-201ENST00000411911 526 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 MTCO3P12-201ENST00000416718 547 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 RPL18AP17-201ENST00000455326 198 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 SCARNA17-201ENST00000516183 144 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC021739.1-201ENST00000559631 174 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 CYP3A52P-201ENST00000563326 91 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AL356432.3-201ENST00000568952 465 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 MIR4713-201ENST00000582691 75 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AL138478.1-201ENST00000612252 832 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC009950.2-201ENST00000636548 183 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 SNORA25-201ENST00000384384 134 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 MIR587-201ENST00000384845 96 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 RPS27P16-201ENST00000425758 201 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC006512.1-201ENST00000468816 291 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AP000797.1-201ENST00000478870 387 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.06□□□□□ -2.4
RIF1Q5UIP0 AC008147.4-201ENST00000617570 1204 ntBASIC0.06□□□□□ -2.4
RIF1Q5UIP0 RNU6-858P-201ENST00000362436 107 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC013267.1-201ENST00000458227 267 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 ACA64.5-201ENST00000516207 127 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 RNA5SP291-201ENST00000517222 105 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.05□□□□□ -2.4
RIF1Q5UIP0 DUXAP1-201ENST00000556632 463 ntBASIC0.05□□□□□ -2.4
RIF1Q5UIP0 AC136618.2-201ENST00000575091 400 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms