Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC7.44□□□□□ -1.22
NCBP3Q53F19 SNORA31-201ENST00000362607 130 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 Y_RNA.107-201ENST00000363190 121 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 RNU6-1209P-201ENST00000363655 107 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 SNORA63D-201ENST00000364359 132 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 RN7SKP81-201ENST00000365603 331 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 RNU6-893P-201ENST00000458841 100 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 RNU6-615P-201ENST00000516065 106 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 RNU6-1149P-201ENST00000516810 97 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 AC107934.2-201ENST00000518653 310 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
NCBP3Q53F19 AC000095.2-202ENST00000637415 154 ntBASIC7.44□□□□□ -1.22
NCBP3Q53F19 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
NCBP3Q53F19 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
NCBP3Q53F19 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC7.43□□□□□ -1.22
NCBP3Q53F19 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
NCBP3Q53F19 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NCBP3Q53F19 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
NCBP3Q53F19 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NCBP3Q53F19 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
NCBP3Q53F19 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.22
NCBP3Q53F19 snoU2_19.1-201ENST00000362361 80 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 UBBP2-201ENST00000376781 231 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 AC007161.1-204ENST00000423039 460 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 RPL39P39-201ENST00000455840 151 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 RNU6-504P-201ENST00000516568 104 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 AP005431.1-201ENST00000618479 319 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.43□□□□□ -1.22
NCBP3Q53F19 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
NCBP3Q53F19 AL672296.1-201ENST00000427780 2158 ntBASIC7.43□□□□□ -1.22
NCBP3Q53F19 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
NCBP3Q53F19 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NCBP3Q53F19 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.42□□□□□ -1.22
NCBP3Q53F19 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
NCBP3Q53F19 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NCBP3Q53F19 Y_RNA.213-201ENST00000364178 111 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 Y_RNA.796-201ENST00000364268 102 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 Y_RNA.799-201ENST00000364992 102 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
NCBP3Q53F19 SDHDP6-201ENST00000414693 480 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 AC245291.1-201ENST00000419501 328 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 LINC02210-201ENST00000444561 288 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 RN7SL547P-201ENST00000490793 290 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 KRTAP13-6P-201ENST00000508999 371 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 RN7SKP21-201ENST00000516503 220 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 FAM71BP1-201ENST00000604431 523 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 CU639417.4-201ENST00000623928 207 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC7.42□□□□□ -1.22
NCBP3Q53F19 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
NCBP3Q53F19 AC016588.2-201ENST00000632484 3021 ntBASIC7.42□□□□□ -1.22
NCBP3Q53F19 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
NCBP3Q53F19 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
NCBP3Q53F19 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
NCBP3Q53F19 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NCBP3Q53F19 FAP-203ENST00000443424 2598 ntTSL 2 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 RNA5SP46-201ENST00000362370 120 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 MIR562-201ENST00000384894 95 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 RNA5SP354-201ENST00000391247 136 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 BX276092.6-201ENST00000430476 250 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 BX276092.8-201ENST00000455722 250 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 RPS26P39-201ENST00000469206 341 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 RNU2-58P-201ENST00000516403 183 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC122688.1-201ENST00000541494 223 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC084364.2-201ENST00000546924 395 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC010547.6-201ENST00000571789 193 ntBASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.41□□□□□ -1.22
NCBP3Q53F19 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 AC140134.1-201ENST00000511830 3544 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NCBP3Q53F19 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 AL022323.4-201ENST00000623980 13120 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NCBP3Q53F19 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NCBP3Q53F19 MIR759-201ENST00000390224 91 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC7.4□□□□□ -1.22
NCBP3Q53F19 AZGP1P2-201ENST00000454506 345 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 SNRPGP5-201ENST00000456003 220 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 AC093591.2-201ENST00000565254 3843 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 AC025574.2-201ENST00000615621 514 ntBASIC7.4□□□□□ -1.22
NCBP3Q53F19 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.4□□□□□ -1.22
NCBP3Q53F19 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NCBP3Q53F19 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.4□□□□□ -1.23
NCBP3Q53F19 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NCBP3Q53F19 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
NCBP3Q53F19 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
NCBP3Q53F19 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNY1P1-201ENST00000364372 112 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNU6-1292P-201ENST00000383856 107 ntBASIC7.39□□□□□ -1.23
NCBP3Q53F19 RNA5SP284-201ENST00000384547 118 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms