Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC134503.1-201ENST00000633048 54 ntBASIC3.47□□□□□ -1.85
KHDC1Q4VXA5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
KHDC1Q4VXA5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KHDC1Q4VXA5 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
KHDC1Q4VXA5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RPL9P7-201ENST00000330965 580 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RNU4-35P-201ENST00000362588 141 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 Y_RNA.128-201ENST00000363391 112 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RNU6-596P-201ENST00000365395 98 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 MIR218-2-201ENST00000385006 110 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 SNORD17-201ENST00000390930 237 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AL513043.1-201ENST00000439124 535 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 CYCSP32-201ENST00000440548 321 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 DAP3P1-201ENST00000441522 278 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RPL9P9-202ENST00000466501 579 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RN7SL594P-201ENST00000470590 287 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 RNU6-1213P-201ENST00000517075 94 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AC026333.2-201ENST00000542164 106 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AC024153.1-201ENST00000603103 365 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 U3.45-201ENST00000607547 219 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AC006111.3-201ENST00000622137 383 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AP001148.1-201ENST00000624124 2359 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 AC110491.1-201ENST00000562191 2010 ntBASIC3.46□□□□□ -1.86
KHDC1Q4VXA5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 MTCO1P12-201ENST00000414273 1543 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 CDC27P3-201ENST00000635418 1910 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 RNU6-78P-201ENST00000362897 107 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 RNU6-942P-201ENST00000363002 107 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 SNORA63-201ENST00000363450 132 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 Y_RNA.197-201ENST00000364004 102 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 Y_RNA.395-201ENST00000383945 109 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 Y_RNA.404-201ENST00000383978 102 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 RNU6-933P-201ENST00000384424 107 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC245291.1-201ENST00000419501 328 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 FTH1P25-201ENST00000447665 469 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AL358232.1-201ENST00000448030 501 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC008155.2-201ENST00000464337 397 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC008571.1-201ENST00000467232 300 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 RN7SL293P-201ENST00000481765 281 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC103996.1-201ENST00000555468 102 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC021739.1-201ENST00000559631 174 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC009314.1-201ENST00000603871 304 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC018889.1-201ENST00000605372 397 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 AC004852.3-201ENST00000614131 326 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 U6.105-201ENST00000637379 88 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 MTND5P19-201ENST00000424872 1794 ntBASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.45□□□□□ -1.86
KHDC1Q4VXA5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 MIR369-201ENST00000362155 70 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 Y_RNA.473-201ENST00000384333 102 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 RNU6-790P-201ENST00000384479 105 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 MIR183-201ENST00000384958 110 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 RPS29P13-201ENST00000402041 169 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 AL133396.1-201ENST00000432048 687 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 RPL7P42-201ENST00000481005 679 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 AK3P2-201ENST00000507976 429 ntBASIC3.44□□□□□ -1.86
KHDC1Q4VXA5 PTP4A1P4-201ENST00000512479 322 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms