Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 Y_RNA.35-201ENST00000362601 101 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 PTMAP5-201ENST00000393073 333 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 Y_RNA.595-201ENST00000410403 105 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 RNU6-1025P-201ENST00000410629 104 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AC012158.1-204ENST00000483430 465 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AC006349.1-201ENST00000555526 235 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AP001005.3-201ENST00000622049 129 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AC048347.1-201ENST00000624621 427 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 MIR6844-201ENST00000637122 62 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AC009541.1-201ENST00000438279 2662 ntBASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RSPO4Q2I0M5 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AL596211.1-201ENST00000569873 2277 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 RNU6-336P-201ENST00000364891 107 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 Y_RNA.294-201ENST00000364916 102 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 SNORA72.2-201ENST00000365028 127 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 RNU6-407P-201ENST00000365280 104 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 RN7SKP186-201ENST00000365371 303 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 RNU6-1286P-201ENST00000383871 107 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 HLFP1-201ENST00000402375 499 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC104333.2-201ENST00000422630 192 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 NF1P5-201ENST00000588287 448 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AL355812.1-201ENST00000603215 216 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 PHKBP1-201ENST00000450951 1951 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 AC107027.3-201ENST00000565095 3473 ntBASIC4.29□□□□□ -1.72
RSPO4Q2I0M5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 RNY1P11-201ENST00000363759 113 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 Y_RNA.251-201ENST00000364551 99 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 Y_RNA.558-201ENST00000384685 113 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 RNU6-821P-201ENST00000390995 107 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 ENSAP1-201ENST00000392855 326 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AL158156.1-201ENST00000422509 473 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 HIGD1AP3-201ENST00000515857 278 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 IGKV2D-36-201ENST00000518643 226 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 MIR4513-201ENST00000581077 86 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 DEFB117-201ENST00000602356 141 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AC123786.2-201ENST00000603459 275 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AL360181.4-201ENST00000621752 134 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AC106754.2-201ENST00000623006 233 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AL034408.1-202ENST00000636088 415 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 MAPK10-349ENST00000641767 3661 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 AC068647.1-201ENST00000489539 2265 ntBASIC4.28□□□□□ -1.72
RSPO4Q2I0M5 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.27□□□□□ -1.73
RSPO4Q2I0M5 Z95331.1-201ENST00000623075 23112 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms