Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 RNU6-137P-201ENST00000363680 108 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RNA5SP513-201ENST00000364648 118 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RNU1-100P-201ENST00000365255 165 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 Y_RNA.570-201ENST00000384750 101 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 MIR93-201ENST00000385024 80 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 PPIAP31-201ENST00000405422 495 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 SNORA11F-201ENST00000408237 128 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RNU6-651P-201ENST00000411040 105 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RNU6-1001P-201ENST00000411265 100 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH1Q08174 RPL7AP25-201ENST00000423357 805 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RPS12P10-201ENST00000427031 377 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RPL23AP1-201ENST00000428990 471 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 COX6B1P7-201ENST00000430845 235 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 NDUFS5P3-201ENST00000450668 321 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC097462.2-201ENST00000504623 481 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RNU6-567P-201ENST00000516746 107 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.24□□□□□ -1.73
PCDH1Q08174 UBL5P4-201ENST00000562584 236 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 MIR4282-201ENST00000583613 67 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH1Q08174 AL160290.3-201ENST00000604869 165 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC019159.1-201ENST00000605094 187 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC011921.3-201ENST00000605540 361 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 MIR7703-201ENST00000620784 77 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 AC008785.1-201ENST00000624475 456 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 MIR7641-1-201ENST00000627518 61 ntBASIC4.24□□□□□ -1.73
PCDH1Q08174 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.24□□□□□ -1.73
PCDH1Q08174 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.24□□□□□ -1.73
PCDH1Q08174 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
PCDH1Q08174 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PCDH1Q08174 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
PCDH1Q08174 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PCDH1Q08174 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 RNU1-15P-201ENST00000353977 144 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 RNU6-858P-201ENST00000362436 107 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 RNU6-626P-201ENST00000363354 107 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 RNU6-159P-201ENST00000391080 106 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 RNA5SP104-201ENST00000410989 118 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AL390729.2-201ENST00000416137 156 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AC074117.2-201ENST00000417130 397 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AL356387.2-201ENST00000422272 243 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AL606753.1-201ENST00000427435 87 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 MTCO1P5-201ENST00000433573 344 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AC007969.2-201ENST00000441891 191 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 TMSB4XP3-201ENST00000445144 114 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH1Q08174 AC078817.1-201ENST00000492623 435 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH1Q08174 RNU6-1278P-201ENST00000516130 107 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AC022559.1-201ENST00000520905 205 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 CR383656.8-201ENST00000549046 145 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 HSPE1P5-201ENST00000561489 272 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 MIR5571-201ENST00000577998 113 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AL138963.2-201ENST00000605137 226 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 AP000346.3-201ENST00000622821 210 ntBASIC4.23□□□□□ -1.73
PCDH1Q08174 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDH1Q08174 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.23□□□□□ -1.73
PCDH1Q08174 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
PCDH1Q08174 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.23□□□□□ -1.73
PCDH1Q08174 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PCDH1Q08174 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PCDH1Q08174 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDH1Q08174 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PCDH1Q08174 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.82-201ENST00000363000 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.92-201ENST00000363043 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.235-201ENST00000364412 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RNA5SP505-201ENST00000364748 108 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.306-201ENST00000365015 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.312-201ENST00000365089 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 Y_RNA.322-201ENST00000365151 102 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RNU6-20P-201ENST00000384106 107 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 MIR329-1-201ENST00000385028 80 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 HLFP1-201ENST00000402375 499 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH1Q08174 MTATP6P29-201ENST00000415057 132 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 RPEP3-201ENST00000425462 676 ntBASIC4.22□□□□□ -1.73
PCDH1Q08174 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms