Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM4P67936 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM4P67936 MTND4P25-201ENST00000441039 533 ntBASIC1.27□□□□□ -2.21
TPM4P67936 CR769776.1-201ENST00000441254 787 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AP000542.1-201ENST00000448473 371 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AC079448.1-201ENST00000449377 373 ntBASIC1.27□□□□□ -2.21
TPM4P67936 RPS26P55-201ENST00000471178 356 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AC108729.1-201ENST00000487812 947 ntBASIC1.27□□□□□ -2.21
TPM4P67936 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TPM4P67936 MTCYBP40-201ENST00000509390 1135 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AC093259.1-201ENST00000509755 300 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.27□□□□□ -2.21
TPM4P67936 RNU6-548P-201ENST00000517083 115 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM4P67936 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
TPM4P67936 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.27□□□□□ -2.21
TPM4P67936 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.27□□□□□ -2.21
TPM4P67936 AL512643.1-201ENST00000635735 524 ntBASIC1.27□□□□□ -2.21
TPM4P67936 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TPM4P67936 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TPM4P67936 RNU6-23P-201ENST00000363283 107 ntBASIC1.26□□□□□ -2.21
TPM4P67936 RNU6-1210P-201ENST00000363775 107 ntBASIC1.26□□□□□ -2.21
TPM4P67936 RNU6-701P-201ENST00000384059 107 ntBASIC1.26□□□□□ -2.21
TPM4P67936 CBX3P9-201ENST00000402326 552 ntBASIC1.26□□□□□ -2.21
TPM4P67936 OR6C66P-201ENST00000414917 930 ntBASIC1.26□□□□□ -2.21
TPM4P67936 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.26□□□□□ -2.21
TPM4P67936 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.26□□□□□ -2.21
TPM4P67936 NEFMP1-201ENST00000443423 1006 ntBASIC1.26□□□□□ -2.21
TPM4P67936 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
TPM4P67936 DUXAP8-207ENST00000456786 622 ntBASIC1.26□□□□□ -2.21
TPM4P67936 AC087477.1-201ENST00000465747 340 ntBASIC1.26□□□□□ -2.21
TPM4P67936 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.26□□□□□ -2.21
TPM4P67936 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.26□□□□□ -2.21
TPM4P67936 AP000873.5-201ENST00000533906 236 ntBASIC1.26□□□□□ -2.21
TPM4P67936 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
TPM4P67936 AC099785.1-201ENST00000605697 437 ntBASIC1.26□□□□□ -2.21
TPM4P67936 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
TPM4P67936 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.26□□□□□ -2.21
TPM4P67936 RNU6-743P-201ENST00000364151 106 ntBASIC1.25□□□□□ -2.21
TPM4P67936 SNORA22-201ENST00000383907 134 ntBASIC1.25□□□□□ -2.21
TPM4P67936 SNORA22C-201ENST00000384614 134 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AL359704.1-201ENST00000411586 781 ntBASIC1.25□□□□□ -2.21
TPM4P67936 UBE2V1P10-201ENST00000414685 269 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AC083875.1-201ENST00000419509 405 ntBASIC1.25□□□□□ -2.21
TPM4P67936 MRPL35P3-201ENST00000421557 364 ntBASIC1.25□□□□□ -2.21
TPM4P67936 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.25□□□□□ -2.21
TPM4P67936 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.25□□□□□ -2.21
TPM4P67936 TOMM22P2-201ENST00000430735 237 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AL513124.1-201ENST00000450410 614 ntBASIC1.25□□□□□ -2.21
TPM4P67936 RPL23AP35-201ENST00000451906 501 ntBASIC1.25□□□□□ -2.21
TPM4P67936 snoU13.15-201ENST00000459407 104 ntBASIC1.25□□□□□ -2.21
TPM4P67936 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.25□□□□□ -2.21
TPM4P67936 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.25□□□□□ -2.21
TPM4P67936 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
TPM4P67936 MTND1P36-201ENST00000522384 936 ntBASIC1.25□□□□□ -2.21
TPM4P67936 RPL21P5-201ENST00000554662 472 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
TPM4P67936 MIR3169-201ENST00000578032 83 ntBASIC1.25□□□□□ -2.21
TPM4P67936 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
TPM4P67936 MIR4303-201ENST00000581299 66 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AC005776.1-201ENST00000603164 290 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AP003485.1-201ENST00000625093 753 ntBASIC1.25□□□□□ -2.21
TPM4P67936 AC008993.2-201ENST00000631744 806 ntBASIC1.25□□□□□ -2.21
TPM4P67936 SNORD14B-201ENST00000364533 90 ntBASIC1.24□□□□□ -2.21
TPM4P67936 RNU6-622P-201ENST00000384272 103 ntBASIC1.24□□□□□ -2.21
TPM4P67936 MIR29B2-201ENST00000385055 81 ntBASIC1.24□□□□□ -2.21
TPM4P67936 MIR618-201ENST00000385287 98 ntBASIC1.24□□□□□ -2.21
TPM4P67936 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TPM4P67936 AC119751.3-201ENST00000399720 670 ntBASIC1.24□□□□□ -2.21
TPM4P67936 MTCO1P17-201ENST00000411522 491 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC016831.2-201ENST00000417179 352 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM4P67936 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.24□□□□□ -2.21
TPM4P67936 AC003071.1-201ENST00000451219 789 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC012308.1-201ENST00000451232 178 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.24□□□□□ -2.21
TPM4P67936 RPL30P1-201ENST00000488676 339 ntBASIC1.24□□□□□ -2.21
TPM4P67936 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
TPM4P67936 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TPM4P67936 OR8K2P-201ENST00000524645 927 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.24□□□□□ -2.21
TPM4P67936 RRN3P3-201ENST00000549207 578 ntBASIC1.24□□□□□ -2.21
TPM4P67936 TRAV32-201ENST00000553993 340 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TPM4P67936 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.24□□□□□ -2.21
TPM4P67936 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.24□□□□□ -2.21
TPM4P67936 AC025811.1-201ENST00000604312 472 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC007363.1-201ENST00000604736 620 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AP002802.2-201ENST00000605877 235 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AL512598.1-201ENST00000610158 273 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC068880.4-201ENST00000623082 495 ntBASIC1.24□□□□□ -2.21
TPM4P67936 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.24□□□□□ -2.21
TPM4P67936 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
TPM4P67936 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
TPM4P67936 MIR302D-201ENST00000362275 68 ntBASIC1.23□□□□□ -2.21
TPM4P67936 Y_RNA.40-201ENST00000362645 93 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RNA5SP493-201ENST00000364115 91 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RNA5SP126-201ENST00000365092 109 ntBASIC1.23□□□□□ -2.21
TPM4P67936 RNU6-160P-201ENST00000384591 107 ntBASIC1.23□□□□□ -2.21
TPM4P67936 Y_RNA.534-201ENST00000384599 112 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms