Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 RNU6-583P-201ENST00000516012 92 ntBASIC0.83□□□□□ -2.28
VBP1P61758 AC023538.1-201ENST00000534576 736 ntBASIC0.83□□□□□ -2.28
VBP1P61758 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.83□□□□□ -2.28
VBP1P61758 MIR4513-201ENST00000581077 86 ntBASIC0.83□□□□□ -2.28
VBP1P61758 AL445435.1-201ENST00000604232 665 ntBASIC0.83□□□□□ -2.28
VBP1P61758 AL022345.2-201ENST00000606307 135 ntBASIC0.83□□□□□ -2.28
VBP1P61758 uc_338.12-201ENST00000616344 181 ntBASIC0.83□□□□□ -2.28
VBP1P61758 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.83□□□□□ -2.28
VBP1P61758 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC0.83□□□□□ -2.28
VBP1P61758 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VBP1P61758 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
VBP1P61758 RNU6-296P-201ENST00000384608 107 ntBASIC0.82□□□□□ -2.28
VBP1P61758 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
VBP1P61758 RNU6-360P-201ENST00000390944 104 ntBASIC0.82□□□□□ -2.28
VBP1P61758 RPL23AP32-201ENST00000395315 459 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 MTND2P20-201ENST00000440805 661 ntBASIC0.82□□□□□ -2.28
VBP1P61758 RPS4XP11-201ENST00000446897 772 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC104629.1-201ENST00000494226 508 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 AC121161.1-201ENST00000510606 652 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC0.82□□□□□ -2.28
VBP1P61758 SCARNA16.2-201ENST00000516520 172 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.82□□□□□ -2.28
VBP1P61758 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VBP1P61758 VN1R83P-201ENST00000595685 445 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC112220.2-201ENST00000605513 533 ntBASIC0.82□□□□□ -2.28
VBP1P61758 MIR8084-201ENST00000614105 89 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC022513.1-201ENST00000624512 117 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC068205.3-201ENST00000636385 468 ntBASIC0.82□□□□□ -2.28
VBP1P61758 AC099654.9-201ENST00000637055 678 ntBASIC0.82□□□□□ -2.28
VBP1P61758 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
VBP1P61758 MTND5P35-201ENST00000557537 1720 ntBASIC0.81□□□□□ -2.28
VBP1P61758 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.81□□□□□ -2.28
VBP1P61758 FTH1P15-201ENST00000406984 280 ntBASIC0.81□□□□□ -2.28
VBP1P61758 RNU2-64P-201ENST00000411315 191 ntBASIC0.81□□□□□ -2.28
VBP1P61758 USP9YP33-201ENST00000412220 421 ntBASIC0.81□□□□□ -2.28
VBP1P61758 RPL21P24-201ENST00000413752 448 ntBASIC0.81□□□□□ -2.28
VBP1P61758 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VBP1P61758 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.81□□□□□ -2.28
VBP1P61758 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.81□□□□□ -2.28
VBP1P61758 AL669831.1-202ENST00000428504 417 ntBASIC0.81□□□□□ -2.28
VBP1P61758 MTND5P14-201ENST00000441481 1267 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.81□□□□□ -2.28
VBP1P61758 AC132479.1-201ENST00000449160 144 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.81□□□□□ -2.28
VBP1P61758 AC130509.1-201ENST00000464158 433 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
VBP1P61758 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.81□□□□□ -2.28
VBP1P61758 RNU6-991P-201ENST00000516168 107 ntBASIC0.81□□□□□ -2.28
VBP1P61758 RNU6-572P-201ENST00000516724 80 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AC009902.1-201ENST00000519351 183 ntBASIC0.81□□□□□ -2.28
VBP1P61758 SLC2A13P1-201ENST00000531560 322 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.81□□□□□ -2.28
VBP1P61758 HIGD1AP17-201ENST00000554576 276 ntBASIC0.81□□□□□ -2.28
VBP1P61758 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AL590240.4-201ENST00000616908 390 ntBASIC0.81□□□□□ -2.28
VBP1P61758 AC009033.1-201ENST00000624279 431 ntBASIC0.81□□□□□ -2.28
VBP1P61758 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
VBP1P61758 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.81□□□□□ -2.28
VBP1P61758 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
VBP1P61758 RNU5B-1-201ENST00000363286 116 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.8□□□□□ -2.28
VBP1P61758 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.8□□□□□ -2.28
VBP1P61758 AC068533.2-201ENST00000411872 306 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.8□□□□□ -2.28
VBP1P61758 EBAG9P1-201ENST00000418955 543 ntBASIC0.8□□□□□ -2.28
VBP1P61758 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.8□□□□□ -2.28
VBP1P61758 AC245047.4-201ENST00000433189 144 ntBASIC0.8□□□□□ -2.28
VBP1P61758 MTCO3P43-201ENST00000440974 771 ntBASIC0.8□□□□□ -2.28
VBP1P61758 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
VBP1P61758 RN7SKP210-201ENST00000459176 261 ntBASIC0.8□□□□□ -2.28
VBP1P61758 MED28P2-201ENST00000475771 317 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.8□□□□□ -2.28
VBP1P61758 SNORA31.3-201ENST00000516029 96 ntBASIC0.8□□□□□ -2.28
VBP1P61758 RNU6-751P-201ENST00000516382 101 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AC136618.2-201ENST00000575091 400 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AC015688.6-201ENST00000577737 104 ntBASIC0.8□□□□□ -2.28
VBP1P61758 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.8□□□□□ -2.28
VBP1P61758 AP001981.2-201ENST00000603241 418 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AL512598.1-201ENST00000610158 273 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AC018926.1-201ENST00000616335 435 ntBASIC0.8□□□□□ -2.28
VBP1P61758 AC097460.3-201ENST00000623099 442 ntBASIC0.8□□□□□ -2.28
VBP1P61758 CDR1-202ENST00000625883 1485 ntBASIC0.8□□□□□ -2.28
VBP1P61758 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VBP1P61758 RNU6-1210P-201ENST00000363775 107 ntBASIC0.79□□□□□ -2.28
VBP1P61758 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
VBP1P61758 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VBP1P61758 AL161935.2-201ENST00000414627 60 ntBASIC0.79□□□□□ -2.28
VBP1P61758 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.79□□□□□ -2.28
VBP1P61758 RPL21P111-201ENST00000418453 477 ntBASIC0.79□□□□□ -2.28
VBP1P61758 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.79□□□□□ -2.28
VBP1P61758 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.79□□□□□ -2.28
VBP1P61758 HMGB3P12-201ENST00000438745 556 ntBASIC0.79□□□□□ -2.28
VBP1P61758 AL158053.1-201ENST00000441503 453 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms