Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AL008636.1-201ENST00000625038 1018 ntBASIC2.92□□□□□ -1.94
CLDN2P57739 AC091564.4-201ENST00000533934 2194 ntBASIC2.92□□□□□ -1.94
CLDN2P57739 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN2P57739 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CLDN2P57739 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN2P57739 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN2P57739 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CLDN2P57739 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CLDN2P57739 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN2P57739 AC103988.1-201ENST00000566382 2177 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN2P57739 CBX3P1-201ENST00000325243 554 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
CLDN2P57739 RNA5SP383-201ENST00000362934 120 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 RNA5SP139-201ENST00000364340 117 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 Y_RNA.303-201ENST00000364998 94 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 RNU6-898P-201ENST00000365627 104 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 RNU6-767P-201ENST00000384132 107 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN2P57739 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN2P57739 AL096701.2-201ENST00000416920 238 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 PGBD4P6-201ENST00000421501 610 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 RPL21P40-201ENST00000428586 483 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN2P57739 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN2P57739 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN2P57739 MTCO2P3-201ENST00000442543 421 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.91□□□□□ -1.94
CLDN2P57739 PMCHL2-203ENST00000457791 237 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC087884.1-201ENST00000469738 328 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN2P57739 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN2P57739 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.91□□□□□ -1.94
CLDN2P57739 RNA5SP356-201ENST00000515972 94 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 SNORD19.2-201ENST00000516978 73 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AP004607.1-201ENST00000524456 203 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC006199.1-201ENST00000548728 219 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC025281.1-201ENST00000567026 265 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.91□□□□□ -1.94
CLDN2P57739 MIR5692C1-201ENST00000585309 91 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC006023.1-201ENST00000603944 259 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 APOOP1-201ENST00000604695 592 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 CTHRC1P1-201ENST00000605383 469 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AL357078.3-201ENST00000607528 618 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN2P57739 AL121757.2-201ENST00000611223 313 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC022306.2-201ENST00000617563 647 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC009248.2-201ENST00000619826 254 ntBASIC2.91□□□□□ -1.94
CLDN2P57739 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
CLDN2P57739 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CLDN2P57739 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CLDN2P57739 RNU6-254P-201ENST00000363377 107 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 SNORA32.2-201ENST00000384049 122 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 RNU6-1013P-201ENST00000384180 107 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 RNU6-1148P-201ENST00000410992 104 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC023141.4-201ENST00000412031 328 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN2P57739 AC096649.2-201ENST00000416186 393 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC016831.2-201ENST00000417179 352 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN2P57739 HIGD1AP2-201ENST00000446367 280 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN2P57739 AC233279.1-201ENST00000455300 423 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC104472.2-201ENST00000469035 601 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 RN7SL330P-201ENST00000469709 307 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN2P57739 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.9□□□□□ -1.95
CLDN2P57739 RNU6-323P-201ENST00000521915 107 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC107953.1-201ENST00000522216 297 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN2P57739 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.9□□□□□ -1.95
CLDN2P57739 AL022345.1-201ENST00000607292 135 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 MIR7153-201ENST00000637758 57 ntBASIC2.9□□□□□ -1.95
CLDN2P57739 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CLDN2P57739 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN2P57739 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CLDN2P57739 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CLDN2P57739 MIR148B-201ENST00000362252 99 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 U3.6-201ENST00000363622 211 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 Y_RNA.166-201ENST00000363730 102 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 RNU6-128P-201ENST00000383976 107 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 RNU6-831P-201ENST00000384548 107 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 MIR450B-201ENST00000401182 78 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 RNA5SP293-201ENST00000410527 113 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.89□□□□□ -1.95
CLDN2P57739 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN2P57739 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN2P57739 IFNA20P-201ENST00000436840 528 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN2P57739 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.89□□□□□ -1.95
CLDN2P57739 Y_RNA.687-201ENST00000516558 91 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AC109479.2-201ENST00000517842 174 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CLDN2P57739 AL121821.2-201ENST00000556081 394 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.89□□□□□ -1.95
CLDN2P57739 MIR3186-201ENST00000577404 85 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AC005730.3-201ENST00000583067 366 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 OR1M4P-201ENST00000589199 287 ntBASIC2.89□□□□□ -1.95
CLDN2P57739 AC008121.1-201ENST00000603244 268 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms