Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 MIR4424-201ENST00000585257 86 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.75□□□□□ -1.81
ATXN1P54253 AC006077.1-201ENST00000604746 343 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.75□□□□□ -1.81
ATXN1P54253 U2.14-201ENST00000615943 113 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATXN1P54253 AC007998.5-201ENST00000622938 237 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 AC006386.2-201ENST00000624491 75 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 AC012005.1-201ENST00000624575 75 ntBASIC3.75□□□□□ -1.81
ATXN1P54253 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.75□□□□□ -1.81
ATXN1P54253 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
ATXN1P54253 HSPA8P1-201ENST00000425843 1833 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 MTND5P10-201ENST00000603719 1809 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.74□□□□□ -1.81
ATXN1P54253 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.74□□□□□ -1.81
ATXN1P54253 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
ATXN1P54253 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 RNU1-33P-201ENST00000364249 162 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RNA5SP42-201ENST00000364278 115 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 Y_RNA.288-201ENST00000364854 92 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.74□□□□□ -1.81
ATXN1P54253 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.74□□□□□ -1.81
ATXN1P54253 Y_RNA.463-201ENST00000384271 102 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 ARL5AP1-201ENST00000418991 388 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.74□□□□□ -1.81
ATXN1P54253 AC005300.1-201ENST00000428401 373 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 CALM2P2-201ENST00000428512 440 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AL356867.1-201ENST00000429623 299 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.74□□□□□ -1.81
ATXN1P54253 NEFMP1-201ENST00000443423 1006 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 TMSB4XP3-201ENST00000445144 114 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 SNORD105B-201ENST00000458770 79 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RBBP4P6-201ENST00000508098 202 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RNU6-120P-201ENST00000516077 103 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RNU6-1023P-201ENST00000516137 106 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RNU6-346P-201ENST00000516288 111 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RNU6-182P-201ENST00000516970 105 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 RPL7P20-201ENST00000520308 745 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AP006587.4-201ENST00000526053 529 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.74□□□□□ -1.81
ATXN1P54253 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.74□□□□□ -1.81
ATXN1P54253 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.74□□□□□ -1.81
ATXN1P54253 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 AC008521.1-201ENST00000587471 187 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AC125232.2-201ENST00000592457 143 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.74□□□□□ -1.81
ATXN1P54253 MTND4LP5-201ENST00000605152 292 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AC012409.4-201ENST00000612923 249 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AC004792.1-201ENST00000614523 137 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 MIR6076-201ENST00000617521 113 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 U4.6-201ENST00000621618 127 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 AC127459.3-201ENST00000624328 466 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
ATXN1P54253 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ATXN1P54253 AC091812.1-201ENST00000432235 1948 ntBASIC3.74□□□□□ -1.81
ATXN1P54253 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATXN1P54253 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
ATXN1P54253 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATXN1P54253 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATXN1P54253 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.14-201ENST00000362415 103 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.274-201ENST00000364714 101 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.373-201ENST00000365600 103 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.785-201ENST00000384290 109 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.515-201ENST00000384535 112 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 SNORA1.3-201ENST00000384676 136 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 RNU6-550P-201ENST00000391057 101 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 RPS4XP3-201ENST00000398541 413 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AL031121.1-201ENST00000406553 254 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 RNU6-1140P-201ENST00000410517 106 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 BX323014.1-201ENST00000412876 237 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 ATG3P1-201ENST00000419507 911 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.73□□□□□ -1.81
ATXN1P54253 NDUFB4P6-201ENST00000436819 366 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.73□□□□□ -1.81
ATXN1P54253 Y_RNA.653-201ENST00000459091 95 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 HMGN2P13-201ENST00000476476 274 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 HMGB1P35-201ENST00000503360 598 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 RNU6-976P-201ENST00000516086 111 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AL137161.1-201ENST00000532231 390 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.73□□□□□ -1.81
ATXN1P54253 AC130289.1-201ENST00000577321 73 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 MIR5583-1-201ENST00000580941 59 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.73□□□□□ -1.81
ATXN1P54253 AL670379.4-201ENST00000605279 254 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AC007619.2-201ENST00000605743 379 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.73□□□□□ -1.81
ATXN1P54253 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 AC103710.2-202ENST00000641454 2853 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
ATXN1P54253 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.73□□□□□ -1.81
ATXN1P54253 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
ATXN1P54253 AC058791.1-201ENST00000608412 3198 ntBASIC3.73□□□□□ -1.81
ATXN1P54253 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms