Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AL031577.2-201ENST00000404133 280 ntBASIC0.31□□□□□ -2.36
SNCAP37840 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 MTND2P4-201ENST00000445034 1004 ntBASIC0.31□□□□□ -2.36
SNCAP37840 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.31□□□□□ -2.36
SNCAP37840 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.31□□□□□ -2.36
SNCAP37840 RNU6-416P-201ENST00000516265 103 ntBASIC0.31□□□□□ -2.36
SNCAP37840 RN7SKP88-201ENST00000516847 250 ntBASIC0.31□□□□□ -2.36
SNCAP37840 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.31□□□□□ -2.36
SNCAP37840 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.31□□□□□ -2.36
SNCAP37840 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.31□□□□□ -2.36
SNCAP37840 MTATP6P3-201ENST00000581686 676 ntBASIC0.31□□□□□ -2.36
SNCAP37840 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.31□□□□□ -2.36
SNCAP37840 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.31□□□□□ -2.36
SNCAP37840 7SK.8-201ENST00000612110 250 ntBASIC0.31□□□□□ -2.36
SNCAP37840 7SK.11-201ENST00000615477 250 ntBASIC0.31□□□□□ -2.36
SNCAP37840 7SK.13-201ENST00000622040 250 ntBASIC0.31□□□□□ -2.36
SNCAP37840 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.31□□□□□ -2.36
SNCAP37840 AC134026.1-201ENST00000623249 2239 ntBASIC0.31□□□□□ -2.36
SNCAP37840 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
SNCAP37840 OR4G2P-201ENST00000328113 903 ntBASIC0.3□□□□□ -2.36
SNCAP37840 RNU6-942P-201ENST00000363002 107 ntBASIC0.3□□□□□ -2.36
SNCAP37840 RNU6-23P-201ENST00000363283 107 ntBASIC0.3□□□□□ -2.36
SNCAP37840 RNU6-619P-201ENST00000365146 108 ntBASIC0.3□□□□□ -2.36
SNCAP37840 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.3□□□□□ -2.36
SNCAP37840 RNU6-110P-201ENST00000384508 104 ntBASIC0.3□□□□□ -2.36
SNCAP37840 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.3□□□□□ -2.36
SNCAP37840 AL669831.1-202ENST00000428504 417 ntBASIC0.3□□□□□ -2.36
SNCAP37840 AC234064.1-201ENST00000436312 247 ntBASIC0.3□□□□□ -2.36
SNCAP37840 KATNBL1P3-201ENST00000443475 909 ntBASIC0.3□□□□□ -2.36
SNCAP37840 NDUFA5P7-201ENST00000452914 242 ntBASIC0.3□□□□□ -2.36
SNCAP37840 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.3□□□□□ -2.36
SNCAP37840 BPTFP1-201ENST00000579209 492 ntBASIC0.3□□□□□ -2.36
SNCAP37840 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.3□□□□□ -2.36
SNCAP37840 AC119674.1-220ENST00000641502 1048 ntBASIC0.3□□□□□ -2.36
SNCAP37840 Y_RNA.191-201ENST00000363972 113 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNA5SP499-201ENST00000363982 119 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNU6-1235P-201ENST00000384559 107 ntBASIC0.29□□□□□ -2.36
SNCAP37840 MIR605-201ENST00000385078 83 ntBASIC0.29□□□□□ -2.36
SNCAP37840 MIR1276-201ENST00000408707 83 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.29□□□□□ -2.36
SNCAP37840 AC019178.2-201ENST00000423595 505 ntBASIC0.29□□□□□ -2.36
SNCAP37840 SNX2P2-201ENST00000424553 323 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AC008267.5-201ENST00000424928 265 ntBASIC0.29□□□□□ -2.36
SNCAP37840 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AC002381.1-201ENST00000447049 280 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AC092001.1-201ENST00000453012 261 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNU6-498P-201ENST00000459468 107 ntBASIC0.29□□□□□ -2.36
SNCAP37840 MTND1P16-201ENST00000465177 898 ntBASIC0.29□□□□□ -2.36
SNCAP37840 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.29□□□□□ -2.36
SNCAP37840 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.29□□□□□ -2.36
SNCAP37840 MTCYBP43-201ENST00000513621 740 ntBASIC0.29□□□□□ -2.36
SNCAP37840 SNORA3.4-201ENST00000515969 96 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNU4-57P-201ENST00000515980 135 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNU5B-3P-201ENST00000516601 115 ntBASIC0.29□□□□□ -2.36
SNCAP37840 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.29□□□□□ -2.36
SNCAP37840 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.29□□□□□ -2.36
SNCAP37840 MIR4781-201ENST00000585250 76 ntBASIC0.29□□□□□ -2.36
SNCAP37840 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.29□□□□□ -2.36
SNCAP37840 AC022432.1-201ENST00000595739 310 ntBASIC0.29□□□□□ -2.36
SNCAP37840 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.29□□□□□ -2.36
SNCAP37840 AP001596.2-201ENST00000608410 312 ntBASIC0.29□□□□□ -2.36
SNCAP37840 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
SNCAP37840 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.28□□□□□ -2.36
SNCAP37840 RNA5SP493-201ENST00000364115 91 ntBASIC0.28□□□□□ -2.36
SNCAP37840 Y_RNA.245-201ENST00000364493 95 ntBASIC0.28□□□□□ -2.36
SNCAP37840 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.28□□□□□ -2.36
SNCAP37840 AC010099.3-201ENST00000423896 409 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.28□□□□□ -2.36
SNCAP37840 TIMM9P1-201ENST00000436122 256 ntBASIC0.28□□□□□ -2.36
SNCAP37840 MTCO3P17-201ENST00000443775 513 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.28□□□□□ -2.36
SNCAP37840 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.28□□□□□ -2.36
SNCAP37840 CECR9-201ENST00000453421 199 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.28□□□□□ -2.36
SNCAP37840 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.28□□□□□ -2.36
SNCAP37840 RNU6-581P-201ENST00000516214 105 ntBASIC0.28□□□□□ -2.36
SNCAP37840 ACA59.2-201ENST00000517061 156 ntBASIC0.28□□□□□ -2.36
SNCAP37840 RNU6-840P-201ENST00000517275 65 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC090142.3-201ENST00000519012 385 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.28□□□□□ -2.36
SNCAP37840 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.28□□□□□ -2.36
SNCAP37840 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.28□□□□□ -2.36
SNCAP37840 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.28□□□□□ -2.36
SNCAP37840 AC093249.1-201ENST00000567049 203 ntBASIC0.28□□□□□ -2.36
SNCAP37840 LARP7P2-201ENST00000575306 125 ntBASIC0.28□□□□□ -2.36
SNCAP37840 MIR3664-201ENST00000579074 99 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC098614.4-201ENST00000607601 462 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AL118556.2-201ENST00000614375 824 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AL359740.1-201ENST00000624340 592 ntBASIC0.28□□□□□ -2.36
SNCAP37840 AC022513.1-201ENST00000624512 117 ntBASIC0.28□□□□□ -2.36
SNCAP37840 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SNCAP37840 MIR548J-201ENST00000408833 112 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.27□□□□□ -2.37
SNCAP37840 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.27□□□□□ -2.37
SNCAP37840 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.27□□□□□ -2.37
SNCAP37840 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms