Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 CECR9-201ENST00000453421 199 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 HMGB1P28-201ENST00000507778 552 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC024589.1-201ENST00000512207 263 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 RNU6-581P-201ENST00000516214 105 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 OR5AL2P-201ENST00000532185 920 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC005832.3-201ENST00000537929 631 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.08□□□□□ -2.24
COL4A5P29400 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A5P29400 AC005951.2-201ENST00000576282 495 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC104763.3-201ENST00000613765 618 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.08□□□□□ -2.24
COL4A5P29400 AC099842.1-201ENST00000619919 596 ntBASIC1.08□□□□□ -2.24
COL4A5P29400 RNU1-39P-201ENST00000383897 165 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MIR95-201ENST00000385072 81 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A5P29400 BTF3L4P3-201ENST00000418879 476 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AL358176.2-201ENST00000425769 204 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A5P29400 AL353706.1-201ENST00000436728 494 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MTND1P31-201ENST00000449206 961 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A5P29400 RPL31P58-201ENST00000469001 379 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 HMGB1P35-201ENST00000503360 598 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A5P29400 AC109329.1-201ENST00000518744 317 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.07□□□□□ -2.24
COL4A5P29400 DEFB130C-202ENST00000530001 230 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC022880.1-201ENST00000534017 973 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.07□□□□□ -2.24
COL4A5P29400 ROCK1P1-201ENST00000573767 549 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A5P29400 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A5P29400 AL512605.2-201ENST00000592972 256 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.07□□□□□ -2.24
COL4A5P29400 MIR2909-201ENST00000617113 69 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AL627230.5-201ENST00000619807 58 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MIR6513-201ENST00000621188 64 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A5P29400 RNU6-1167P-201ENST00000363227 94 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 U8.3-201ENST00000363321 132 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 RNU6-560P-201ENST00000364007 108 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MIR936-201ENST00000401264 98 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 VN1R36P-201ENST00000414936 291 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AL158823.1-201ENST00000418441 478 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COL4A5P29400 RPL31P35-201ENST00000431058 377 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MTND1P28-201ENST00000435623 950 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 PTGES3P1-201ENST00000439531 483 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.07□□□□□ -2.24
COL4A5P29400 AC093752.1-206ENST00000511823 336 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A5P29400 RNU6-927P-201ENST00000516199 100 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.07□□□□□ -2.24
COL4A5P29400 SNRPGP1-201ENST00000553864 222 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 MIR4782-201ENST00000577987 79 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 BNIP3P9-201ENST00000603714 553 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC069545.1-201ENST00000605671 358 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 AC084824.5-201ENST00000612009 413 ntBASIC1.07□□□□□ -2.24
COL4A5P29400 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL4A5P29400 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A5P29400 MTND4P12-201ENST00000498999 1377 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
COL4A5P29400 RNA5SP276-201ENST00000362580 94 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 SNORD114-19-201ENST00000363072 75 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 RNU6-288P-201ENST00000363690 104 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
COL4A5P29400 HMGN2P39-201ENST00000398005 273 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 MIR1305-201ENST00000408300 86 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC127391.1-201ENST00000411737 98 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 SNORD56-201ENST00000413522 71 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC096920.1-201ENST00000423991 241 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.06□□□□□ -2.24
COL4A5P29400 AC244035.1-201ENST00000430042 390 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.06□□□□□ -2.24
COL4A5P29400 AL161651.1-201ENST00000440882 223 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 BTBD7P2-201ENST00000441962 620 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC020550.1-201ENST00000447385 163 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A5P29400 AC010631.1-201ENST00000474150 156 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.06□□□□□ -2.24
COL4A5P29400 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.06□□□□□ -2.24
COL4A5P29400 SNORA25.11-201ENST00000515935 105 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 RNU6-1225P-201ENST00000516336 65 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC107953.1-201ENST00000522216 297 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC087894.1-201ENST00000538359 518 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AC087897.1-201ENST00000550134 156 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 DUXAP1-201ENST00000556632 463 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 AF129408.1-201ENST00000608767 431 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 PCMTD1P7-201ENST00000634506 357 ntBASIC1.06□□□□□ -2.24
COL4A5P29400 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
COL4A5P29400 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
COL4A5P29400 AC092447.10-201ENST00000620607 1652 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 SNORD14B-201ENST00000364533 90 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 RNU6-658P-201ENST00000384606 106 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 MTND4P3-201ENST00000417829 541 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 SKA2P1-201ENST00000425592 390 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 AC004941.2-201ENST00000427009 228 ntBASIC1.05□□□□□ -2.24
COL4A5P29400 RSU1P2-202ENST00000437884 485 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms