Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR93-201ENST00000385024 80 ntBASIC4.74□□□□□ -1.65
RXRBP28702 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.74□□□□□ -1.65
RXRBP28702 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC4.74□□□□□ -1.65
RXRBP28702 ELOCP18-201ENST00000434209 337 ntBASIC4.74□□□□□ -1.65
RXRBP28702 HMGN2P13-201ENST00000476476 274 ntBASIC4.74□□□□□ -1.65
RXRBP28702 AC025445.1-201ENST00000502728 300 ntBASIC4.74□□□□□ -1.65
RXRBP28702 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.74□□□□□ -1.65
RXRBP28702 RNU4-71P-201ENST00000516258 113 ntBASIC4.74□□□□□ -1.65
RXRBP28702 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.74□□□□□ -1.65
RXRBP28702 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
RXRBP28702 LRRC37A5P-203ENST00000580181 585 ntBASIC4.74□□□□□ -1.65
RXRBP28702 MIR4273-201ENST00000582824 84 ntBASIC4.74□□□□□ -1.65
RXRBP28702 RPS29P30-201ENST00000600975 111 ntBASIC4.74□□□□□ -1.65
RXRBP28702 MIR3976-201ENST00000606807 139 ntBASIC4.74□□□□□ -1.65
RXRBP28702 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RXRBP28702 AC092435.4-201ENST00000623012 4159 ntBASIC4.74□□□□□ -1.65
RXRBP28702 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.74□□□□□ -1.65
RXRBP28702 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
RXRBP28702 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RXRBP28702 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RXRBP28702 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.73□□□□□ -1.65
RXRBP28702 U8.8-201ENST00000365399 135 ntBASIC4.73□□□□□ -1.65
RXRBP28702 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.73□□□□□ -1.65
RXRBP28702 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.73□□□□□ -1.65
RXRBP28702 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.73□□□□□ -1.65
RXRBP28702 SNORA31.6-201ENST00000516241 130 ntBASIC4.73□□□□□ -1.65
RXRBP28702 AC069113.1-201ENST00000517763 267 ntBASIC4.73□□□□□ -1.65
RXRBP28702 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.73□□□□□ -1.65
RXRBP28702 AC010620.2-201ENST00000600135 313 ntBASIC4.73□□□□□ -1.65
RXRBP28702 AL139395.1-201ENST00000603662 160 ntBASIC4.73□□□□□ -1.65
RXRBP28702 AL591424.2-201ENST00000617023 128 ntBASIC4.73□□□□□ -1.65
RXRBP28702 MIR7843-201ENST00000622274 79 ntBASIC4.73□□□□□ -1.65
RXRBP28702 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.73□□□□□ -1.65
RXRBP28702 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RXRBP28702 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
RXRBP28702 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RXRBP28702 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.72□□□□□ -1.65
RXRBP28702 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RXRBP28702 Z83843.1-201ENST00000604070 3685 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RNU1-15P-201ENST00000353977 144 ntBASIC4.72□□□□□ -1.65
RXRBP28702 Y_RNA.277-201ENST00000364754 102 ntBASIC4.72□□□□□ -1.65
RXRBP28702 Y_RNA.458-201ENST00000384240 102 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RNU6-493P-201ENST00000391321 108 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RNU4-47P-201ENST00000410876 114 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RNU6-607P-201ENST00000411283 108 ntBASIC4.72□□□□□ -1.65
RXRBP28702 AL138752.1-201ENST00000452964 351 ntBASIC4.72□□□□□ -1.65
RXRBP28702 AC234775.1-201ENST00000454247 670 ntBASIC4.72□□□□□ -1.65
RXRBP28702 AL136097.1-201ENST00000456945 913 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RPL37P6-201ENST00000460682 294 ntBASIC4.72□□□□□ -1.65
RXRBP28702 UBL5P3-201ENST00000475112 231 ntBASIC4.72□□□□□ -1.65
RXRBP28702 ACA59.1-201ENST00000515966 143 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RNU6-390P-201ENST00000516259 103 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RN7SKP258-201ENST00000517151 304 ntBASIC4.72□□□□□ -1.65
RXRBP28702 RN7SKP234-201ENST00000517173 224 ntBASIC4.72□□□□□ -1.65
RXRBP28702 AC022868.1-201ENST00000517767 391 ntBASIC4.72□□□□□ -1.65
RXRBP28702 DEFB108E-201ENST00000524692 240 ntBASIC4.72□□□□□ -1.65
RXRBP28702 CBX3P4-201ENST00000538909 354 ntBASIC4.72□□□□□ -1.65
RXRBP28702 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.72□□□□□ -1.65
RXRBP28702 MIR4643-201ENST00000577473 78 ntBASIC4.72□□□□□ -1.65
RXRBP28702 MIR4435-1-201ENST00000582552 80 ntBASIC4.72□□□□□ -1.65
RXRBP28702 OR1M4P-201ENST00000589199 287 ntBASIC4.72□□□□□ -1.65
RXRBP28702 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.72□□□□□ -1.65
RXRBP28702 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.72□□□□□ -1.65
RXRBP28702 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.72□□□□□ -1.65
RXRBP28702 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
RXRBP28702 U4.6-201ENST00000621618 127 ntBASIC4.72□□□□□ -1.65
RXRBP28702 IGHVIII-44-202ENST00000636235 289 ntBASIC4.72□□□□□ -1.65
RXRBP28702 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RXRBP28702 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RXRBP28702 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
RXRBP28702 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RXRBP28702 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
RXRBP28702 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.71□□□□□ -1.65
RXRBP28702 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.71□□□□□ -1.66
RXRBP28702 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.71□□□□□ -1.66
RXRBP28702 Y_RNA.200-201ENST00000364018 102 ntBASIC4.71□□□□□ -1.66
RXRBP28702 SNORA70E-201ENST00000384492 135 ntBASIC4.71□□□□□ -1.66
RXRBP28702 SNORD115-46-201ENST00000390982 71 ntBASIC4.71□□□□□ -1.66
RXRBP28702 RNU6-817P-201ENST00000391083 104 ntBASIC4.71□□□□□ -1.66
RXRBP28702 Y_RNA.592-201ENST00000410274 109 ntBASIC4.71□□□□□ -1.66
RXRBP28702 RNU6-1140P-201ENST00000410517 106 ntBASIC4.71□□□□□ -1.66
RXRBP28702 MTCO3P29-201ENST00000432119 779 ntBASIC4.71□□□□□ -1.66
RXRBP28702 AC069285.2-201ENST00000440210 275 ntBASIC4.71□□□□□ -1.66
RXRBP28702 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.71□□□□□ -1.66
RXRBP28702 AC067942.3-201ENST00000512025 362 ntBASIC4.71□□□□□ -1.66
RXRBP28702 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.71□□□□□ -1.66
RXRBP28702 RNA5SP356-201ENST00000515972 94 ntBASIC4.71□□□□□ -1.66
RXRBP28702 RNA5SP154-201ENST00000516193 111 ntBASIC4.71□□□□□ -1.66
RXRBP28702 Y_RNA.683-201ENST00000516508 93 ntBASIC4.71□□□□□ -1.66
RXRBP28702 AC100770.1-201ENST00000532310 322 ntBASIC4.71□□□□□ -1.66
RXRBP28702 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.71□□□□□ -1.66
RXRBP28702 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.71□□□□□ -1.66
RXRBP28702 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 185.3 ms