Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.9□□□□□ -2.11
NCK1P16333 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.9□□□□□ -2.11
NCK1P16333 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.9□□□□□ -2.11
NCK1P16333 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 TAF9P1-201ENST00000445421 515 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 TAF9P2-201ENST00000454958 515 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AP001025.1-201ENST00000486139 332 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RNU2-53P-201ENST00000516257 147 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RNU6-685P-201ENST00000517088 95 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RN7SKP256-201ENST00000517201 314 ntBASIC1.9□□□□□ -2.11
NCK1P16333 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NCK1P16333 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.9□□□□□ -2.11
NCK1P16333 AC233702.2-202ENST00000562547 291 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AL022161.1-201ENST00000604390 213 ntBASIC1.9□□□□□ -2.11
NCK1P16333 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.9□□□□□ -2.11
NCK1P16333 NDUFA8P1-201ENST00000605525 367 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC093788.1-201ENST00000609356 927 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC091304.9-201ENST00000612091 226 ntBASIC1.9□□□□□ -2.11
NCK1P16333 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RMST_4.1-201ENST00000616886 107 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC108479.2-201ENST00000617314 601 ntBASIC1.9□□□□□ -2.11
NCK1P16333 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
NCK1P16333 AC025034.2-201ENST00000623264 286 ntBASIC1.9□□□□□ -2.11
NCK1P16333 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.9□□□□□ -2.11
NCK1P16333 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NCK1P16333 AP006437.1-201ENST00000641440 3685 ntBASIC1.89□□□□□ -2.11
NCK1P16333 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NCK1P16333 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
NCK1P16333 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NCK1P16333 Y_RNA.22-201ENST00000362492 102 ntBASIC1.89□□□□□ -2.11
NCK1P16333 RNU6-371P-201ENST00000364283 108 ntBASIC1.89□□□□□ -2.11
NCK1P16333 MIR10A-201ENST00000385043 110 ntBASIC1.89□□□□□ -2.11
NCK1P16333 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NCK1P16333 AL512604.1-201ENST00000404812 257 ntBASIC1.89□□□□□ -2.11
NCK1P16333 UBE2V1P10-201ENST00000414685 269 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AC010099.3-201ENST00000423896 409 ntBASIC1.89□□□□□ -2.11
NCK1P16333 USP9YP18-201ENST00000425912 695 ntBASIC1.89□□□□□ -2.11
NCK1P16333 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.89□□□□□ -2.11
NCK1P16333 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.89□□□□□ -2.11
NCK1P16333 AL136380.1-201ENST00000447970 162 ntBASIC1.89□□□□□ -2.11
NCK1P16333 ZNF114P1-201ENST00000453500 292 ntBASIC1.89□□□□□ -2.11
NCK1P16333 RNU6-123P-201ENST00000516163 102 ntBASIC1.89□□□□□ -2.11
NCK1P16333 SNORA31.23-201ENST00000517219 133 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AC107953.1-201ENST00000522216 297 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.89□□□□□ -2.11
NCK1P16333 AC025678.1-201ENST00000567861 338 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AC090897.2-201ENST00000581715 130 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.89□□□□□ -2.11
NCK1P16333 AC008521.1-201ENST00000587471 187 ntBASIC1.89□□□□□ -2.11
NCK1P16333 APOOP1-201ENST00000604695 592 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AC092354.1-201ENST00000606057 376 ntBASIC1.89□□□□□ -2.11
NCK1P16333 AC012360.2-201ENST00000609349 391 ntBASIC1.89□□□□□ -2.11
NCK1P16333 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
NCK1P16333 MTND5P17-201ENST00000418405 1603 ntBASIC1.88□□□□□ -2.11
NCK1P16333 FARSBP1-201ENST00000435808 1778 ntBASIC1.88□□□□□ -2.11
NCK1P16333 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.88□□□□□ -2.11
NCK1P16333 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NCK1P16333 RNU4-82P-201ENST00000362443 140 ntBASIC1.88□□□□□ -2.11
NCK1P16333 SNORD3E-201ENST00000362899 217 ntBASIC1.88□□□□□ -2.11
NCK1P16333 RNU6-61P-201ENST00000365528 109 ntBASIC1.88□□□□□ -2.11
NCK1P16333 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
NCK1P16333 CISD1P1-201ENST00000393907 327 ntBASIC1.88□□□□□ -2.11
NCK1P16333 CBX3P9-201ENST00000402326 552 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AL023284.1-201ENST00000403956 276 ntBASIC1.88□□□□□ -2.11
NCK1P16333 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
NCK1P16333 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NCK1P16333 AC074117.2-201ENST00000417130 397 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
NCK1P16333 CALM1P1-201ENST00000442082 433 ntBASIC1.88□□□□□ -2.11
NCK1P16333 EPS15P1-201ENST00000448836 336 ntBASIC1.88□□□□□ -2.11
NCK1P16333 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.88□□□□□ -2.11
NCK1P16333 RN7SL274P-201ENST00000492268 272 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.88□□□□□ -2.11
NCK1P16333 AC091965.2-201ENST00000512324 613 ntBASIC1.88□□□□□ -2.11
NCK1P16333 RNU6-415P-201ENST00000516252 97 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.88□□□□□ -2.11
NCK1P16333 AC022616.3-201ENST00000523940 148 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.88□□□□□ -2.11
NCK1P16333 MIR5089-201ENST00000580047 84 ntBASIC1.88□□□□□ -2.11
NCK1P16333 MIR5692A1-201ENST00000580523 69 ntBASIC1.88□□□□□ -2.11
NCK1P16333 MIR3682-201ENST00000581338 84 ntBASIC1.88□□□□□ -2.11
NCK1P16333 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
NCK1P16333 AL158032.1-201ENST00000605401 106 ntBASIC1.88□□□□□ -2.11
NCK1P16333 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
NCK1P16333 DUXAP9-208ENST00000622815 614 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AC079248.2-201ENST00000623779 326 ntBASIC1.88□□□□□ -2.11
NCK1P16333 AL157786.1-207ENST00000627771 695 ntBASIC1.88□□□□□ -2.11
NCK1P16333 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.88□□□□□ -2.11
NCK1P16333 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
NCK1P16333 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
NCK1P16333 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NCK1P16333 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
NCK1P16333 RNU6-655P-201ENST00000362858 107 ntBASIC1.87□□□□□ -2.11
NCK1P16333 RNU5F-7P-201ENST00000363696 115 ntBASIC1.87□□□□□ -2.11
NCK1P16333 RNU6-1210P-201ENST00000363775 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms