Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.3□□□□□ -1.72
NID1P14543 Y_RNA.637-201ENST00000459424 114 ntBASIC4.3□□□□□ -1.72
NID1P14543 RN7SKP122-201ENST00000515923 296 ntBASIC4.3□□□□□ -1.72
NID1P14543 SNORD116-26-201ENST00000516006 96 ntBASIC4.3□□□□□ -1.72
NID1P14543 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.3□□□□□ -1.72
NID1P14543 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.3□□□□□ -1.72
NID1P14543 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NID1P14543 AC018448.1-201ENST00000552843 316 ntBASIC4.3□□□□□ -1.72
NID1P14543 AC091042.1-201ENST00000579213 173 ntBASIC4.3□□□□□ -1.72
NID1P14543 AC004467.1-201ENST00000615678 330 ntBASIC4.3□□□□□ -1.72
NID1P14543 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.3□□□□□ -1.72
NID1P14543 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.3□□□□□ -1.72
NID1P14543 AL034408.1-202ENST00000636088 415 ntBASIC4.3□□□□□ -1.72
NID1P14543 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NID1P14543 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NID1P14543 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.3□□□□□ -1.72
NID1P14543 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NID1P14543 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.29□□□□□ -1.72
NID1P14543 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NID1P14543 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
NID1P14543 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 CUL1P1-201ENST00000509510 2425 ntBASIC4.29□□□□□ -1.72
NID1P14543 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 Y_RNA.172-201ENST00000363765 102 ntBASIC4.29□□□□□ -1.72
NID1P14543 RNU6-270P-201ENST00000364131 105 ntBASIC4.29□□□□□ -1.72
NID1P14543 Y_RNA.337-201ENST00000365312 102 ntBASIC4.29□□□□□ -1.72
NID1P14543 Y_RNA.498-201ENST00000384460 102 ntBASIC4.29□□□□□ -1.72
NID1P14543 RNU6-429P-201ENST00000384582 108 ntBASIC4.29□□□□□ -1.72
NID1P14543 RNA5SP332-201ENST00000391063 115 ntBASIC4.29□□□□□ -1.72
NID1P14543 NDUFB4P7-201ENST00000423198 363 ntBASIC4.29□□□□□ -1.72
NID1P14543 AL138785.1-201ENST00000425821 331 ntBASIC4.29□□□□□ -1.72
NID1P14543 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.29□□□□□ -1.72
NID1P14543 GPM6BP3-201ENST00000442797 145 ntBASIC4.29□□□□□ -1.72
NID1P14543 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 AL357134.1-201ENST00000445848 426 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 KC877373.1-201ENST00000479066 408 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.29□□□□□ -1.72
NID1P14543 AP001880.2-201ENST00000538233 448 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 AL161713.1-201ENST00000555538 145 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.29□□□□□ -1.72
NID1P14543 MIR5571-201ENST00000577998 113 ntBASIC4.29□□□□□ -1.72
NID1P14543 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
NID1P14543 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.29□□□□□ -1.72
NID1P14543 MIR6780A-201ENST00000615089 68 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC140113.4-201ENST00000622087 222 ntBASIC4.29□□□□□ -1.72
NID1P14543 AC091932.3-201ENST00000624223 323 ntBASIC4.29□□□□□ -1.72
NID1P14543 AL672167.1-203ENST00000641299 2975 ntBASIC4.29□□□□□ -1.72
NID1P14543 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NID1P14543 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.29□□□□□ -1.72
NID1P14543 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
NID1P14543 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
NID1P14543 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 RNA5SP267-201ENST00000364893 126 ntBASIC4.28□□□□□ -1.72
NID1P14543 SNORD96B-201ENST00000386148 79 ntBASIC4.28□□□□□ -1.72
NID1P14543 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC112220.1-201ENST00000434628 355 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.28□□□□□ -1.72
NID1P14543 RPL36AP41-201ENST00000493820 306 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.28□□□□□ -1.72
NID1P14543 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 RN7SKP179-201ENST00000516126 217 ntBASIC4.28□□□□□ -1.72
NID1P14543 RNA5SP54-201ENST00000516951 92 ntBASIC4.28□□□□□ -1.72
NID1P14543 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.28□□□□□ -1.72
NID1P14543 AL110118.1-201ENST00000553543 400 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC127455.1-201ENST00000565496 145 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC006254.2-201ENST00000603259 279 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC069294.1-201ENST00000608397 350 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC005086.4-201ENST00000623065 213 ntBASIC4.28□□□□□ -1.72
NID1P14543 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.28□□□□□ -1.72
NID1P14543 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.28□□□□□ -1.72
NID1P14543 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
NID1P14543 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NID1P14543 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
NID1P14543 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NID1P14543 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.27□□□□□ -1.73
NID1P14543 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NID1P14543 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
NID1P14543 MTND5P35-201ENST00000557537 1720 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms