Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
BMP4P12644 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
BMP4P12644 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
BMP4P12644 Y_RNA.179-201ENST00000363844 90 ntBASIC4.4□□□□□ -1.71
BMP4P12644 Y_RNA.309-201ENST00000365046 111 ntBASIC4.4□□□□□ -1.71
BMP4P12644 SNORA22-201ENST00000383907 134 ntBASIC4.4□□□□□ -1.71
BMP4P12644 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
BMP4P12644 AL590762.4-201ENST00000425885 253 ntBASIC4.4□□□□□ -1.71
BMP4P12644 SNRPEP9-201ENST00000436794 238 ntBASIC4.4□□□□□ -1.71
BMP4P12644 AL357134.1-201ENST00000445848 426 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RPS17P2-201ENST00000461663 408 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RN7SL443P-201ENST00000464331 290 ntBASIC4.4□□□□□ -1.71
BMP4P12644 AC140172.1-201ENST00000502928 141 ntBASIC4.4□□□□□ -1.71
BMP4P12644 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.4□□□□□ -1.71
BMP4P12644 FCF1P8-201ENST00000510322 597 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RNU6-453P-201ENST00000516819 85 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RNU6-703P-201ENST00000516946 107 ntBASIC4.4□□□□□ -1.71
BMP4P12644 Y_RNA.712-201ENST00000517011 92 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RNU4-60P-201ENST00000517239 135 ntBASIC4.4□□□□□ -1.71
BMP4P12644 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.4□□□□□ -1.71
BMP4P12644 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BMP4P12644 MIR7154-201ENST00000620673 73 ntBASIC4.4□□□□□ -1.71
BMP4P12644 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
BMP4P12644 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.4□□□□□ -1.71
BMP4P12644 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
BMP4P12644 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.4□□□□□ -1.71
BMP4P12644 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BMP4P12644 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BMP4P12644 AF127577.6-201ENST00000623352 2191 ntBASIC4.4□□□□□ -1.71
BMP4P12644 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
BMP4P12644 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
BMP4P12644 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
BMP4P12644 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.39□□□□□ -1.71
BMP4P12644 MAPK10-320ENST00000641462 6696 ntBASIC4.39□□□□□ -1.71
BMP4P12644 SNORD56.1-201ENST00000362913 68 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNU6-1285P-201ENST00000363480 105 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNY1P11-201ENST00000363759 113 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNA5SP455-201ENST00000365190 119 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNA5SP235-201ENST00000365411 114 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNU6-178P-201ENST00000384631 104 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RPL26P27-201ENST00000414397 437 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.39□□□□□ -1.71
BMP4P12644 OR2AM1P-201ENST00000422137 422 ntBASIC4.39□□□□□ -1.71
BMP4P12644 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AL354714.3-201ENST00000447284 493 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC009963.2-201ENST00000453431 138 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RPL23AP14-201ENST00000468281 468 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC091179.3-201ENST00000474761 144 ntBASIC4.39□□□□□ -1.71
BMP4P12644 NIP7P2-201ENST00000485801 544 ntBASIC4.39□□□□□ -1.71
BMP4P12644 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.39□□□□□ -1.71
BMP4P12644 RN7SKP122-201ENST00000515923 296 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNU6-436P-201ENST00000516171 114 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNU6-844P-201ENST00000517175 102 ntBASIC4.39□□□□□ -1.71
BMP4P12644 RNA5SP291-201ENST00000517222 105 ntBASIC4.39□□□□□ -1.71
BMP4P12644 MIR4436B2-201ENST00000581415 91 ntBASIC4.39□□□□□ -1.71
BMP4P12644 MIR4436B1-201ENST00000583272 91 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.39□□□□□ -1.71
BMP4P12644 AC087783.2-201ENST00000605070 562 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.39□□□□□ -1.71
BMP4P12644 AC083809.1-201ENST00000615051 472 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC100827.5-201ENST00000615883 426 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC013791.1-201ENST00000616619 62 ntBASIC4.39□□□□□ -1.71
BMP4P12644 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.39□□□□□ -1.71
BMP4P12644 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.39□□□□□ -1.71
BMP4P12644 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
BMP4P12644 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.39□□□□□ -1.71
BMP4P12644 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.39□□□□□ -1.71
BMP4P12644 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
BMP4P12644 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.39□□□□□ -1.71
BMP4P12644 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
BMP4P12644 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
BMP4P12644 AC107027.3-201ENST00000565095 3473 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
BMP4P12644 MAPK10-303ENST00000641324 3959 ntBASIC4.38□□□□□ -1.71
BMP4P12644 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.38□□□□□ -1.71
BMP4P12644 RNU6-407P-201ENST00000365280 104 ntBASIC4.38□□□□□ -1.71
BMP4P12644 SNORA2.3-201ENST00000383920 135 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RNU6-1310P-201ENST00000384153 107 ntBASIC4.38□□□□□ -1.71
BMP4P12644 MIR585-201ENST00000384887 94 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AL512633.1-201ENST00000399931 655 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RNA5SP89-201ENST00000410300 108 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RN7SKP53-201ENST00000411337 315 ntBASIC4.38□□□□□ -1.71
BMP4P12644 COX6B1P1-201ENST00000415962 213 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AL450023.3-201ENST00000440592 271 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.38□□□□□ -1.71
BMP4P12644 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.38□□□□□ -1.71
BMP4P12644 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.38□□□□□ -1.71
BMP4P12644 RN7SL41P-201ENST00000476144 297 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RN7SL319P-201ENST00000480656 221 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AC083982.1-201ENST00000485679 344 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AC016632.1-201ENST00000503994 196 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RNU2-56P-201ENST00000516826 190 ntBASIC4.38□□□□□ -1.71
BMP4P12644 RNA5SP392-201ENST00000516905 112 ntBASIC4.38□□□□□ -1.71
BMP4P12644 SNORA31.20-201ENST00000517111 133 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AP001328.1-201ENST00000528550 176 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AP004242.1-201ENST00000533701 349 ntBASIC4.38□□□□□ -1.71
BMP4P12644 TRAV28-201ENST00000557548 323 ntBASIC4.38□□□□□ -1.71
BMP4P12644 LINC00933-203ENST00000559812 219 ntBASIC4.38□□□□□ -1.71
BMP4P12644 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms