Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CHGAP10645 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CHGAP10645 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.33□□□□□ -1.4
CHGAP10645 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 Y_RNA.81-201ENST00000362997 102 ntBASIC6.33□□□□□ -1.4
CHGAP10645 RNU6-312P-201ENST00000364629 107 ntBASIC6.33□□□□□ -1.4
CHGAP10645 RNU6-1130P-201ENST00000365434 107 ntBASIC6.33□□□□□ -1.4
CHGAP10645 SNORA70.4-201ENST00000365509 134 ntBASIC6.33□□□□□ -1.4
CHGAP10645 RNU6-449P-201ENST00000383914 107 ntBASIC6.33□□□□□ -1.4
CHGAP10645 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC6.33□□□□□ -1.4
CHGAP10645 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 HMGB3P8-201ENST00000449709 577 ntBASIC6.33□□□□□ -1.4
CHGAP10645 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.33□□□□□ -1.4
CHGAP10645 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC6.33□□□□□ -1.4
CHGAP10645 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC6.33□□□□□ -1.4
CHGAP10645 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.33□□□□□ -1.4
CHGAP10645 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC6.33□□□□□ -1.4
CHGAP10645 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CHGAP10645 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC6.32□□□□□ -1.4
CHGAP10645 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHGAP10645 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CHGAP10645 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CHGAP10645 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHGAP10645 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC6.32□□□□□ -1.4
CHGAP10645 RNU6-1290P-201ENST00000362957 109 ntBASIC6.32□□□□□ -1.4
CHGAP10645 RNA5SP130-201ENST00000364431 114 ntBASIC6.32□□□□□ -1.4
CHGAP10645 Y_RNA.400-201ENST00000383963 111 ntBASIC6.32□□□□□ -1.4
CHGAP10645 SNORA36A-201ENST00000384221 132 ntBASIC6.32□□□□□ -1.4
CHGAP10645 MIR554-201ENST00000384874 96 ntBASIC6.32□□□□□ -1.4
CHGAP10645 MIR493-201ENST00000385254 89 ntBASIC6.32□□□□□ -1.4
CHGAP10645 MIR888-201ENST00000401186 77 ntBASIC6.32□□□□□ -1.4
CHGAP10645 FTH1P15-201ENST00000406984 280 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AC138623.1-201ENST00000418060 216 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC6.32□□□□□ -1.4
CHGAP10645 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC6.32□□□□□ -1.4
CHGAP10645 RNU6-625P-201ENST00000459412 107 ntBASIC6.32□□□□□ -1.4
CHGAP10645 SNORA31.23-201ENST00000517219 133 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AC055872.1-201ENST00000570978 278 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC6.32□□□□□ -1.4
CHGAP10645 MIR3158-1-201ENST00000583596 81 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AC084757.4-201ENST00000616350 526 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AC091895.1-201ENST00000624494 256 ntBASIC6.32□□□□□ -1.4
CHGAP10645 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC6.32□□□□□ -1.4
CHGAP10645 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 AL136964.1-201ENST00000622038 2990 ntBASIC6.32□□□□□ -1.4
CHGAP10645 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHGAP10645 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHGAP10645 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CHGAP10645 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.31□□□□□ -1.4
CHGAP10645 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC6.31□□□□□ -1.4
CHGAP10645 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHGAP10645 RNU4-80P-201ENST00000363200 141 ntBASIC6.31□□□□□ -1.4
CHGAP10645 SNORA62.3-201ENST00000365110 153 ntBASIC6.31□□□□□ -1.4
CHGAP10645 RNU6-1248P-201ENST00000391096 64 ntBASIC6.31□□□□□ -1.4
CHGAP10645 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC6.31□□□□□ -1.4
CHGAP10645 RPL21P66-201ENST00000426566 466 ntBASIC6.31□□□□□ -1.4
CHGAP10645 RPL35AP15-201ENST00000468042 339 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC140059.1-201ENST00000489238 361 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC6.31□□□□□ -1.4
CHGAP10645 HMGB3P3-201ENST00000510526 400 ntBASIC6.31□□□□□ -1.4
CHGAP10645 CKS1BP7-201ENST00000522230 235 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC018448.1-201ENST00000552843 316 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC6.31□□□□□ -1.4
CHGAP10645 AL359198.2-201ENST00000611836 194 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC112200.1-201ENST00000625015 234 ntBASIC6.31□□□□□ -1.4
CHGAP10645 AC092593.1-201ENST00000515413 1815 ntBASIC6.31□□□□□ -1.4
CHGAP10645 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHGAP10645 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CHGAP10645 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.31□□□□□ -1.4
CHGAP10645 MTND5P35-201ENST00000557537 1720 ntBASIC6.3□□□□□ -1.4
CHGAP10645 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.3□□□□□ -1.4
CHGAP10645 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHGAP10645 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CHGAP10645 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHGAP10645 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHGAP10645 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC6.3□□□□□ -1.4
CHGAP10645 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHGAP10645 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHGAP10645 DLEU2_6.3-201ENST00000340052 136 ntBASIC6.3□□□□□ -1.4
CHGAP10645 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CHGAP10645 Y_RNA.7-201ENST00000362352 102 ntBASIC6.3□□□□□ -1.4
CHGAP10645 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.3□□□□□ -1.4
CHGAP10645 Y_RNA.488-201ENST00000384403 102 ntBASIC6.3□□□□□ -1.4
CHGAP10645 Y_RNA.568-201ENST00000384742 113 ntBASIC6.3□□□□□ -1.4
CHGAP10645 RNU6-1154P-201ENST00000391001 104 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms