Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.48□□□□□ -1.69
GRIN3BO60391 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
GRIN3BO60391 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIN3BO60391 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIN3BO60391 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
GRIN3BO60391 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GRIN3BO60391 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIN3BO60391 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
GRIN3BO60391 RNY1P16-201ENST00000363063 111 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 MIR548I2-201ENST00000408348 149 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 RNU6-1156P-201ENST00000410365 100 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 SNORD56-201ENST00000413522 71 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.47□□□□□ -1.69
GRIN3BO60391 RN7SL585P-201ENST00000470538 280 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 AC069499.1-201ENST00000489433 509 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 AC093852.1-201ENST00000503587 266 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 AC105758.1-201ENST00000506038 399 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 SNORA70.16-201ENST00000516390 95 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 RNU7-4P-201ENST00000516961 62 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 RNA5SP291-201ENST00000517222 105 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIN3BO60391 AC022882.1-201ENST00000532142 501 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 HSBP1P1-201ENST00000555205 166 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.47□□□□□ -1.69
GRIN3BO60391 AC062037.2-201ENST00000610137 73 ntBASIC4.47□□□□□ -1.69
GRIN3BO60391 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.47□□□□□ -1.69
GRIN3BO60391 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.47□□□□□ -1.69
GRIN3BO60391 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
GRIN3BO60391 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
GRIN3BO60391 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
GRIN3BO60391 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
GRIN3BO60391 AC068254.2-201ENST00000623938 3577 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIN3BO60391 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-37P-201ENST00000362692 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 Y_RNA.106-201ENST00000363189 100 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-11P-201ENST00000364234 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-99P-201ENST00000364721 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-25P-201ENST00000383873 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-1-201ENST00000383898 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-48P-201ENST00000384161 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-36P-201ENST00000384172 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 Y_RNA.447-201ENST00000384184 113 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-4P-201ENST00000384205 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-5P-201ENST00000384238 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-3P-201ENST00000384314 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-16P-201ENST00000384385 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 Y_RNA.512-201ENST00000384518 102 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-15P-201ENST00000384534 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-2-201ENST00000384627 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-29P-201ENST00000384637 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-9-201ENST00000384776 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-33P-201ENST00000384793 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 MIR513A2-201ENST00000385249 127 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 SNORD17-201ENST00000390930 237 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 SNORA40C-201ENST00000391285 128 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 MIR1252-201ENST00000408861 65 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AL160275.2-201ENST00000412010 394 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AL353997.1-201ENST00000432936 108 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.46□□□□□ -1.7
GRIN3BO60391 AC133134.1-201ENST00000466800 359 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AC006517.1-201ENST00000480485 328 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AC025554.1-201ENST00000505641 188 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 NDUFB4P9-201ENST00000511646 388 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.46□□□□□ -1.7
GRIN3BO60391 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.46□□□□□ -1.7
GRIN3BO60391 AL033523.1-201ENST00000605153 153 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 RNU6-6P-201ENST00000606623 107 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 MIR3976-201ENST00000606807 139 ntBASIC4.46□□□□□ -1.7
GRIN3BO60391 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.46□□□□□ -1.7
GRIN3BO60391 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.46□□□□□ -1.7
GRIN3BO60391 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
GRIN3BO60391 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GRIN3BO60391 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
GRIN3BO60391 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
GRIN3BO60391 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.45□□□□□ -1.7
GRIN3BO60391 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.45□□□□□ -1.7
GRIN3BO60391 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.45□□□□□ -1.7
GRIN3BO60391 AC011266.1-201ENST00000624119 3569 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
GRIN3BO60391 RPL9P7-201ENST00000330965 580 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RNU6-450P-201ENST00000364654 107 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RNU4-42P-201ENST00000364738 142 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RNU1-140P-201ENST00000365040 165 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 SNORD14.1-201ENST00000365609 90 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RNA5SP424-201ENST00000390988 115 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
GRIN3BO60391 RNA5SP239-201ENST00000410218 129 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AL117339.3-201ENST00000418733 162 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 EIF4EP2-201ENST00000422816 654 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AL513043.1-201ENST00000439124 535 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AC107083.1-201ENST00000439643 279 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 U8.21-201ENST00000459536 136 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 RPL9P9-202ENST00000466501 579 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.45□□□□□ -1.7
GRIN3BO60391 AC109479.2-201ENST00000517842 174 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.45□□□□□ -1.7
GRIN3BO60391 AC093732.2-201ENST00000607950 274 ntBASIC4.45□□□□□ -1.7
GRIN3BO60391 AP000553.6-201ENST00000641242 118 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms