Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR195-201ENST00000385194 87 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 MIR616-201ENST00000385293 97 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ACTN4O43707 U3.40-201ENST00000408706 208 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 RNA5SP113-201ENST00000410486 84 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.22□□□□□ -1.57
ACTN4O43707 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.22□□□□□ -1.57
ACTN4O43707 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.22□□□□□ -1.57
ACTN4O43707 AC011276.1-201ENST00000469688 323 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 SCARNA8-201ENST00000515924 131 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 SNORD116-26-201ENST00000516006 96 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 RNU6-436P-201ENST00000516171 114 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 MIR5582-201ENST00000579697 68 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 AL391358.1-201ENST00000605342 190 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 AC090132.2-201ENST00000615881 347 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.22□□□□□ -1.57
ACTN4O43707 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
ACTN4O43707 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
ACTN4O43707 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ACTN4O43707 AC010329.5-201ENST00000623497 2174 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.22□□□□□ -1.57
ACTN4O43707 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ACTN4O43707 AL450326.2-201ENST00000421913 1962 ntBASIC5.22□□□□□ -1.57
ACTN4O43707 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.22□□□□□ -1.57
ACTN4O43707 AC134026.1-201ENST00000623249 2239 ntBASIC5.21□□□□□ -1.57
ACTN4O43707 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
ACTN4O43707 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.21□□□□□ -1.57
ACTN4O43707 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ACTN4O43707 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
ACTN4O43707 RNA5SP235-201ENST00000365411 114 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 MIR544A-201ENST00000384855 91 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 MIR15B-201ENST00000385045 98 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 RN7SKP167-201ENST00000411047 285 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 RN7SKP100-201ENST00000411258 284 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 RPS20P14-201ENST00000412545 360 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 COX6B1P1-201ENST00000415962 213 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AC096649.2-201ENST00000416186 393 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN4O43707 AL590383.1-201ENST00000428602 75 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 RPL23AP14-201ENST00000468281 468 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN4O43707 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.21□□□□□ -1.58
ACTN4O43707 RNU6-1183P-201ENST00000517054 60 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AC090281.1-201ENST00000523019 276 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN4O43707 AC021231.3-201ENST00000558497 370 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AC091979.2-201ENST00000607514 214 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AL591926.4-201ENST00000616895 298 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 AL136164.3-201ENST00000624429 3978 ntBASIC5.21□□□□□ -1.58
ACTN4O43707 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.21□□□□□ -1.58
ACTN4O43707 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN4O43707 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
ACTN4O43707 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
ACTN4O43707 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.21□□□□□ -1.58
ACTN4O43707 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN4O43707 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN4O43707 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN4O43707 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 AC068700.1-201ENST00000565862 3754 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
ACTN4O43707 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ACTN4O43707 RNU6-1141P-201ENST00000364520 107 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 RNU6-915P-201ENST00000364943 103 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 Z98749.2-208ENST00000381646 500 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 Y_RNA.521-201ENST00000384560 114 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AL160275.2-201ENST00000412010 394 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AC007969.2-201ENST00000441891 191 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 H2AFZP5-201ENST00000446960 382 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC5.2□□□□□ -1.58
ACTN4O43707 AP000705.1-201ENST00000454567 350 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AC245047.8-201ENST00000456455 284 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 UQCRHP4-201ENST00000471686 272 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AC091179.3-201ENST00000474761 144 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 RN7SL817P-201ENST00000480777 288 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AL110118.1-201ENST00000553543 400 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 AL391261.4-201ENST00000616012 481 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 AC068870.2-201ENST00000620635 389 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 LINC01355-201ENST00000566551 5444 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ACTN4O43707 ZNF702P-202ENST00000434269 1966 ntBASIC5.2□□□□□ -1.58
ACTN4O43707 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.2□□□□□ -1.58
ACTN4O43707 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
ACTN4O43707 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTN4O43707 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTN4O43707 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
ACTN4O43707 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
ACTN4O43707 RNU1-20P-201ENST00000363314 162 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RNU6-768P-201ENST00000384683 107 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RNU6-588P-201ENST00000410281 105 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RN7SKP61-201ENST00000410642 295 ntBASIC5.19□□□□□ -1.58
ACTN4O43707 RPS26P42-201ENST00000413485 326 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms