Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.39□□□□□ -2.19
UPK2O00526 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK2O00526 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 AP004607.1-201ENST00000524456 203 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.39□□□□□ -2.19
UPK2O00526 AC091544.4-201ENST00000555268 342 ntBASIC1.39□□□□□ -2.19
UPK2O00526 ZNF519P3-201ENST00000557158 1032 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.39□□□□□ -2.19
UPK2O00526 AC104581.2-201ENST00000572227 430 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AC078795.2-201ENST00000602835 1252 ntBASIC1.39□□□□□ -2.19
UPK2O00526 SEPT7P9-203ENST00000604116 343 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AL022154.1-201ENST00000604698 785 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AL132822.1-201ENST00000617063 513 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AC108479.2-201ENST00000617314 601 ntBASIC1.39□□□□□ -2.19
UPK2O00526 AC092192.1-201ENST00000633154 1018 ntBASIC1.39□□□□□ -2.19
UPK2O00526 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
UPK2O00526 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
UPK2O00526 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK2O00526 snoU2_19.1-201ENST00000362361 80 ntBASIC1.38□□□□□ -2.19
UPK2O00526 SNORD14B-201ENST00000364533 90 ntBASIC1.38□□□□□ -2.19
UPK2O00526 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
UPK2O00526 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
UPK2O00526 Y_RNA.500-201ENST00000384466 111 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AC118469.1-201ENST00000442943 488 ntBASIC1.38□□□□□ -2.19
UPK2O00526 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.38□□□□□ -2.19
UPK2O00526 Y_RNA.687-201ENST00000516558 91 ntBASIC1.38□□□□□ -2.19
UPK2O00526 SNORA31.23-201ENST00000517219 133 ntBASIC1.38□□□□□ -2.19
UPK2O00526 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.38□□□□□ -2.19
UPK2O00526 GNAI2P1-201ENST00000541815 315 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 MIR3122-201ENST00000577243 73 ntBASIC1.38□□□□□ -2.19
UPK2O00526 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AC012065.4-201ENST00000602445 679 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AC174048.1-201ENST00000603389 144 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AL031281.1-201ENST00000604049 488 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AL670379.2-201ENST00000604983 252 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AL670379.4-201ENST00000605279 254 ntBASIC1.38□□□□□ -2.19
UPK2O00526 AC092106.3-201ENST00000611308 722 ntBASIC1.38□□□□□ -2.19
UPK2O00526 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.38□□□□□ -2.19
UPK2O00526 AL031667.3-201ENST00000620124 655 ntBASIC1.38□□□□□ -2.19
UPK2O00526 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
UPK2O00526 HAUS6P2-201ENST00000433254 2404 ntBASIC1.37□□□□□ -2.19
UPK2O00526 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 MIR412-201ENST00000362142 91 ntBASIC1.37□□□□□ -2.19
UPK2O00526 Y_RNA.18-201ENST00000362461 102 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RNU6-1164P-201ENST00000364428 107 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RNU6-1200P-201ENST00000384162 107 ntBASIC1.37□□□□□ -2.19
UPK2O00526 SNORD14D-201ENST00000384390 87 ntBASIC1.37□□□□□ -2.19
UPK2O00526 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPK2O00526 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPK2O00526 CISD1P1-201ENST00000393907 327 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
UPK2O00526 SNORD56-201ENST00000413522 71 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AC114491.1-201ENST00000416095 246 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AC006366.1-201ENST00000422002 759 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AC007283.2-201ENST00000424739 197 ntBASIC1.37□□□□□ -2.19
UPK2O00526 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 AL627311.1-201ENST00000431514 115 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RPL7P54-201ENST00000438336 674 ntBASIC1.37□□□□□ -2.19
UPK2O00526 MTND2P29-201ENST00000438595 412 ntBASIC1.37□□□□□ -2.19
UPK2O00526 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AL353752.1-201ENST00000454946 260 ntBASIC1.37□□□□□ -2.19
UPK2O00526 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK2O00526 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 PTP4A1P4-201ENST00000512479 322 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AC109329.1-201ENST00000518744 317 ntBASIC1.37□□□□□ -2.19
UPK2O00526 MTND4LP18-201ENST00000526864 291 ntBASIC1.37□□□□□ -2.19
UPK2O00526 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK2O00526 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.37□□□□□ -2.19
UPK2O00526 CR383656.8-201ENST00000549046 145 ntBASIC1.37□□□□□ -2.19
UPK2O00526 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK2O00526 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.37□□□□□ -2.19
UPK2O00526 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.37□□□□□ -2.19
UPK2O00526 AP001004.1-201ENST00000582468 324 ntBASIC1.37□□□□□ -2.19
UPK2O00526 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
UPK2O00526 MTCO2P2-201ENST00000591258 225 ntBASIC1.37□□□□□ -2.19
UPK2O00526 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 AC103810.8-201ENST00000607347 118 ntBASIC1.37□□□□□ -2.19
UPK2O00526 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.37□□□□□ -2.19
UPK2O00526 AC103710.2-202ENST00000641454 2853 ntBASIC1.37□□□□□ -2.19
UPK2O00526 RNU6-1210P-201ENST00000363775 107 ntBASIC1.36□□□□□ -2.19
UPK2O00526 RNU6-1179P-201ENST00000384667 107 ntBASIC1.36□□□□□ -2.19
UPK2O00526 MIR578-201ENST00000384828 96 ntBASIC1.36□□□□□ -2.19
UPK2O00526 MIR583-201ENST00000384846 75 ntBASIC1.36□□□□□ -2.19
UPK2O00526 MIR29C-201ENST00000385231 88 ntBASIC1.36□□□□□ -2.19
UPK2O00526 RNA5SP465-201ENST00000391195 109 ntBASIC1.36□□□□□ -2.19
UPK2O00526 SNORA40.18-201ENST00000391200 128 ntBASIC1.36□□□□□ -2.19
UPK2O00526 RNA5SP212-201ENST00000391223 107 ntBASIC1.36□□□□□ -2.19
UPK2O00526 BTF3L4P2-201ENST00000392798 346 ntBASIC1.36□□□□□ -2.19
UPK2O00526 RNU4-26P-201ENST00000410270 107 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms