Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 RPL22P22-201ENST00000395439 379 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AL133475.1-201ENST00000404414 305 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 CCNG1P1-201ENST00000406783 885 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AL669831.1-202ENST00000428504 417 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 RNU6-581P-201ENST00000516214 105 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AC006518.2-201ENST00000542513 940 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 FAM106DP-201ENST00000586416 501 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AC104984.5-201ENST00000586878 94 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 MIR6715A-201ENST00000615929 79 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AC079416.3-201ENST00000624479 549 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.28□□□□□ -2.36
AP4S1Q9Y587 AC023934.1-201ENST00000574529 2389 ntBASIC0.28□□□□□ -2.36
AP4S1Q9Y587 ELL2P3-201ENST00000457883 1602 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 RNU6-942P-201ENST00000363002 107 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC119751.3-201ENST00000399720 670 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 RPS3AP1-201ENST00000413190 320 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 C8orf59P1-201ENST00000429930 303 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC098934.3-201ENST00000430450 190 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 GTF2IP13-201ENST00000438487 386 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 RPS15AP9-201ENST00000439856 381 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC002381.1-201ENST00000447049 280 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 RNU6-1092P-201ENST00000516955 87 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 MIR3169-201ENST00000578032 83 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 MIR4714-201ENST00000580728 77 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 VN1R88P-201ENST00000596787 292 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 RPL30P11-203ENST00000598995 310 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC104465.1-201ENST00000611365 139 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 AC008993.2-201ENST00000631744 806 ntBASIC0.27□□□□□ -2.37
AP4S1Q9Y587 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
AP4S1Q9Y587 MIR337-201ENST00000362281 93 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 RNU6-23P-201ENST00000363283 107 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AL358794.1-201ENST00000445689 381 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AL160314.1-201ENST00000490836 438 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC044913.1-201ENST00000557200 430 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC002545.1-201ENST00000592511 181 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AL020997.3-201ENST00000602843 359 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AP001596.2-201ENST00000608410 312 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC022513.1-201ENST00000624512 117 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AC068647.2-201ENST00000637380 353 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 MTCO1P18-201ENST00000455518 1419 ntBASIC0.26□□□□□ -2.37
AP4S1Q9Y587 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 RNU6-14P-201ENST00000384630 106 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AL022400.1-201ENST00000423946 935 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AL589872.1-201ENST00000426602 288 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AL096829.2-201ENST00000446582 742 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AC092001.1-201ENST00000453012 261 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 MTND1P16-201ENST00000465177 898 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AC084024.2-201ENST00000503480 791 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 RNU6-991P-201ENST00000516168 107 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 RNA5SP168-201ENST00000516642 112 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 RNA5SP290-201ENST00000517133 127 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AL512605.2-201ENST00000592972 256 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 AC083806.3-201ENST00000614016 455 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.25□□□□□ -2.37
AP4S1Q9Y587 OR4G1P-203ENST00000641984 1631 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AL442644.1-201ENST00000454390 3105 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 Y_RNA.99-201ENST00000363138 105 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 RNU5E-8P-201ENST00000363502 116 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 RNU6-546P-201ENST00000383991 107 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 RNU6-110P-201ENST00000384508 104 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 RNU6-360P-201ENST00000390944 104 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 AL139397.2-201ENST00000404529 772 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 SNX2P2-201ENST00000424553 323 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 ELOCP14-201ENST00000428070 331 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 TIMM9P1-201ENST00000436122 256 ntBASIC0.24□□□□□ -2.37
AP4S1Q9Y587 ELOCP7-201ENST00000439968 331 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms