Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RNU6-1010P-201ENST00000362757 107 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RNU6-289P-201ENST00000364093 107 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RNU1-78P-201ENST00000391248 165 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 MTCO2P1-201ENST00000424648 477 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC108667.1-201ENST00000428618 249 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 MTND5P25-201ENST00000430499 799 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC017099.1-201ENST00000448261 1028 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 snoU13.9-201ENST00000458927 103 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RPL36AP21-201ENST00000490372 323 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC099513.1-201ENST00000490423 301 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC025465.3-201ENST00000510570 311 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RN7SKP219-201ENST00000516825 296 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 RNU6-143P-201ENST00000516942 93 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 SNORA31.19-201ENST00000517079 126 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC109329.1-201ENST00000518744 317 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 COPS8P3-201ENST00000526024 482 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC087441.2-201ENST00000529141 262 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC090186.1-201ENST00000605991 572 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AC112204.3-201ENST00000623822 332 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 AP003476.1-201ENST00000623984 516 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
VPS29Q9UBQ0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 RNU6-853P-201ENST00000364306 107 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 RNU4-91P-201ENST00000364778 135 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 UBE2D3P3-201ENST00000426992 425 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 CR769776.1-201ENST00000441254 787 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 RNU7-59P-201ENST00000459101 61 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 RNVU1-2-201ENST00000516326 135 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 DEFB130C-202ENST00000530001 230 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 AC012065.4-201ENST00000602445 679 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 AC012360.2-201ENST00000609349 391 ntBASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.12□□□□□ -2.23
VPS29Q9UBQ0 HAUS6P2-201ENST00000433254 2404 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 RNU6-858P-201ENST00000362436 107 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 MIR19A-201ENST00000384878 82 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 MTCO1P56-201ENST00000401674 224 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AP1B1P2-201ENST00000416196 106 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 TIMM9P2-201ENST00000419324 266 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AL591704.2-201ENST00000421658 181 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 SNRPEP7-201ENST00000438350 220 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AL078601.1-201ENST00000444542 271 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 RPL31P58-201ENST00000469001 379 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC027338.1-201ENST00000514840 825 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 RRN3P3-201ENST00000549207 578 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC087897.1-201ENST00000550134 156 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AL512347.1-201ENST00000566420 503 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC126365.2-201ENST00000580630 379 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 uc_338.15-201ENST00000615470 191 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC009269.6-201ENST00000621778 588 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 PCMTD1P7-201ENST00000634506 357 ntBASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
VPS29Q9UBQ0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 RNA5SP99-201ENST00000364020 114 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 BTF3P4-201ENST00000418852 495 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 NCOR1P3-201ENST00000420479 303 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 USP9YP35-201ENST00000435696 412 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC245517.4-201ENST00000448601 281 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 MED28P2-201ENST00000475771 317 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC108729.1-201ENST00000487812 947 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 SNORA31.17-201ENST00000516953 127 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 RNU6-64P-201ENST00000517119 105 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 RNU6-902P-201ENST00000517212 91 ntBASIC1.1□□□□□ -2.23
VPS29Q9UBQ0 AP004247.1-201ENST00000531556 1289 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms