Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC079140.2-201ENST00000506193 142 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 SNORD116-28-201ENST00000516123 91 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 TRAV32-201ENST00000553993 340 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC138915.2-201ENST00000569776 97 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 MIR4698-201ENST00000577795 80 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AF038458.1-201ENST00000588406 262 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AL133445.2-201ENST00000611191 527 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 AC016911.1-201ENST00000613297 452 ntBASIC0.68□□□□□ -2.3
COMMD3Q9UBI1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 RNU6-481P-201ENST00000384194 107 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 RNU6-482P-201ENST00000391068 107 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC013410.2-201ENST00000422627 201 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 CR848007.2-201ENST00000424918 787 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 JTBP1-201ENST00000441314 247 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC104058.1-201ENST00000448028 297 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC023194.1-201ENST00000493084 308 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC108078.1-201ENST00000508073 725 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 SNORA76.2-201ENST00000517095 137 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC018630.3-201ENST00000542637 96 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AL353997.4-201ENST00000586196 166 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 KATNBL1P5-201ENST00000605015 517 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 AC120349.2-201ENST00000625002 298 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
COMMD3Q9UBI1 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 SNORD114-19-201ENST00000363072 75 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RNU6-1274P-201ENST00000384557 107 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 MIR532-201ENST00000385025 91 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 EIF1P1-201ENST00000421436 341 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 TRIM60P13-201ENST00000432350 1283 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 MTND5P15-201ENST00000434246 349 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 BRK1P2-201ENST00000442875 223 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 MTATP6P30-201ENST00000443540 664 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RPL23AP35-201ENST00000451906 501 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AC114982.1-201ENST00000469402 321 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RPL26P26-201ENST00000480251 434 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AL163540.1-201ENST00000485382 386 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RNU6-551P-201ENST00000516661 103 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 RN7SKP258-201ENST00000517151 304 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AC023632.1-201ENST00000518463 375 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AP006587.4-201ENST00000526053 529 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AC136932.1-201ENST00000574771 208 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AP000942.3-201ENST00000603702 160 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AP000860.1-201ENST00000605250 559 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AC008945.2-201ENST00000606056 604 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.66□□□□□ -2.3
COMMD3Q9UBI1 FARSBP1-201ENST00000435808 1778 ntBASIC0.65□□□□□ -2.3
COMMD3Q9UBI1 RNU6-1010P-201ENST00000362757 107 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 RNU6-968P-201ENST00000384076 107 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC119751.3-201ENST00000399720 670 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 RNU4-27P-201ENST00000410889 139 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 POLR2J4-204ENST00000418424 324 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 UBE2V1P8-201ENST00000437166 265 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 PGBD4P5-201ENST00000445958 426 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 RPL31P3-201ENST00000458430 332 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 RPL30P1-201ENST00000488676 339 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 HMGN1P13-201ENST00000505795 138 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC019176.1-201ENST00000518519 225 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 MIR4524B-201ENST00000581569 115 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC073410.2-201ENST00000603240 332 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC004908.3-201ENST00000610248 625 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC091895.1-201ENST00000624494 256 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC008993.2-201ENST00000631744 806 ntBASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
COMMD3Q9UBI1 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 RNU6-23P-201ENST00000363283 107 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 RNU6-97P-201ENST00000363387 104 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 AC083799.1-201ENST00000366451 910 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 RNU6-432P-201ENST00000384196 109 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 RNU6-114P-201ENST00000384704 105 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 AC006461.1-201ENST00000412637 326 ntBASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.64□□□□□ -2.31
COMMD3Q9UBI1 AL365400.1-201ENST00000431854 640 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms