Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRFN1Q9P244 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LRFN1Q9P244 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 Y_RNA.70-201ENST00000362886 110 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 Y_RNA.86-201ENST00000363020 111 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 SNORA38.1-201ENST00000364172 131 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RNU5E-7P-201ENST00000365290 117 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 MIR184-201ENST00000384962 84 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 U3.26-201ENST00000391236 204 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AL356776.1-201ENST00000406574 447 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 RPL31P12-201ENST00000422587 358 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 AL365400.1-201ENST00000431854 640 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 AC004383.1-201ENST00000438135 289 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RN7SL807P-201ENST00000470923 297 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 TRBVA-201ENST00000498804 316 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AC008628.2-201ENST00000502605 298 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AC025465.4-201ENST00000513422 638 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RNU6-507P-201ENST00000516045 100 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 Y_RNA.702-201ENST00000516843 96 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AC018638.8-201ENST00000588755 281 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RNU6-85P-201ENST00000605989 107 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 RNU6-91P-201ENST00000607774 107 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 uc_338.14-201ENST00000613162 166 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 AC093913.1-201ENST00000614178 329 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 MIR3529-201ENST00000637713 78 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 MFSD8-233ENST00000641482 4860 ntBASIC3.16□□□□□ -1.9
LRFN1Q9P244 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.16□□□□□ -1.9
LRFN1Q9P244 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.9
LRFN1Q9P244 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LRFN1Q9P244 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
LRFN1Q9P244 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 SNORD113-7-201ENST00000363762 77 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 SNORA68.1-201ENST00000364537 132 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 RNU6-487P-201ENST00000365430 104 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 MIR147B-201ENST00000390185 80 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AL162578.1-201ENST00000406202 378 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 Z99755.1-201ENST00000414048 380 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 RPL21P111-201ENST00000418453 477 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC005326.1-201ENST00000429197 123 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC013470.1-201ENST00000453438 462 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AL441985.1-201ENST00000457727 251 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 SCARNA17.1-201ENST00000516211 143 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 SCARNA17.2-201ENST00000516334 143 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 RNU5B-3P-201ENST00000516601 115 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 RNU6-1314P-201ENST00000517139 104 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 PSMA3P-201ENST00000555485 635 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 CTHRC1P1-201ENST00000605383 469 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 SCARNA17.4-201ENST00000614296 143 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC104260.1-201ENST00000616660 539 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.91
LRFN1Q9P244 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.15□□□□□ -1.91
LRFN1Q9P244 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LRFN1Q9P244 AC073073.2-201ENST00000609827 2578 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC007496.3-201ENST00000624987 3443 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-858P-201ENST00000362436 107 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-254P-201ENST00000363377 107 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-1083P-201ENST00000384022 107 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-843P-201ENST00000384454 104 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-1148P-201ENST00000410992 104 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 AL513185.2-201ENST00000425543 193 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RPS29P31-201ENST00000446147 164 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 AL049873.1-201ENST00000480540 376 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 MTCO2P30-201ENST00000503662 364 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 SNORA31.6-201ENST00000516241 130 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
LRFN1Q9P244 RNU6-323P-201ENST00000521915 107 ntBASIC3.14□□□□□ -1.91
LRFN1Q9P244 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms