Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.65□□□□□ -1.67
CXXC1Q9P0U4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AP001642.1-201ENST00000624727 2117 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNU4-90P-201ENST00000362773 141 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNA5SP175-201ENST00000364275 119 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNU6-1141P-201ENST00000364520 107 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 Y_RNA.277-201ENST00000364754 102 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNU6-290P-201ENST00000365212 101 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RPS4XP3-201ENST00000398541 413 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 CKS1BP6-201ENST00000424932 240 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 FTH1P6-201ENST00000430768 320 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AL445305.1-201ENST00000432577 575 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 MED28P2-201ENST00000475771 317 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNU6-928P-201ENST00000516876 104 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNU6-1198P-201ENST00000516904 67 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RN7SKP40-201ENST00000517211 242 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AP006245.1-201ENST00000522549 120 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC120057.2-201ENST00000571520 271 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC009163.5-201ENST00000575421 637 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 MIR3529-201ENST00000637713 78 ntBASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.64□□□□□ -1.67
CXXC1Q9P0U4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 Y_RNA.29-201ENST00000362570 113 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 SNORD63-201ENST00000384262 68 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 PTMAP5-201ENST00000393073 333 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 Z92545.1-201ENST00000411782 234 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 SSXP4-201ENST00000451349 245 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 RPS4XP13-201ENST00000483219 789 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 RNU6-496P-201ENST00000516145 99 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC022080.3-201ENST00000544433 482 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC130289.1-201ENST00000577321 73 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 MIR3124-201ENST00000582636 67 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AL391261.4-201ENST00000616012 481 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC005296.1-201ENST00000616145 209 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC004825.2-201ENST00000616634 455 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 SNORA43.4-201ENST00000629559 138 ntBASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CXXC1Q9P0U4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 AC016588.2-201ENST00000632484 3021 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNU6-1159P-201ENST00000362933 107 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNU5B-2P-201ENST00000363036 113 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNU6-137P-201ENST00000363680 108 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNY1-201ENST00000364228 113 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNU6-318P-201ENST00000384283 103 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 SNORA53-201ENST00000391141 249 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 SNORD58.1-201ENST00000391313 66 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNA5SP239-201ENST00000410218 129 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 SNORD12B-201ENST00000410433 91 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 AC096638.1-201ENST00000444678 216 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 PRELID3BP1-201ENST00000457142 540 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 RNA5SP73-201ENST00000516744 108 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 AC233702.9-201ENST00000581528 203 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 AC010201.1-201ENST00000605051 540 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 MIR6500-201ENST00000622700 86 ntBASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
CXXC1Q9P0U4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms