Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC016724.1-201ENST00000453215 421 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RNU1-131P-201ENST00000458943 161 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RPS29P22-201ENST00000472363 168 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC109445.1-201ENST00000512356 383 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RPL7P20-201ENST00000520308 745 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC090821.2-201ENST00000523552 176 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RAB11AP2-201ENST00000545905 639 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 MIR544B-201ENST00000582372 78 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 MIR4295-201ENST00000585286 85 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AP003465.2-201ENST00000602571 373 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 AL138889.2-201ENST00000603883 242 ntBASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-946P-201ENST00000383878 107 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 MIR1178-201ENST00000408396 91 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 PIGPP2-201ENST00000411569 458 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AL589872.1-201ENST00000426602 288 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC063976.3-201ENST00000426849 329 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 TOMM20P4-201ENST00000427861 435 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AL159987.2-201ENST00000432754 307 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AL133547.1-201ENST00000448546 220 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC093899.1-201ENST00000457984 376 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC112206.3-201ENST00000514578 389 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 RNA5SP341-201ENST00000516261 117 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 RNU7-40P-201ENST00000516397 64 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 SNORA43.2-201ENST00000516652 128 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 RNU6-1092P-201ENST00000516955 87 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 LRRC6P1-201ENST00000532188 885 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC090115.3-201ENST00000553218 849 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC009712.1-201ENST00000564938 316 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC015688.6-201ENST00000577737 104 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 KC877982.1-201ENST00000602313 470 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 BX248123.2-201ENST00000606318 124 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC211433.2-201ENST00000608433 387 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC108747.1-201ENST00000609508 535 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 MIR7848-201ENST00000617402 101 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 YWHAEP7-203ENST00000622054 312 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AC130454.1-201ENST00000622948 401 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 CTSLP2-204ENST00000629029 392 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 ICE2P2-201ENST00000483823 2787 ntBASIC0.66□□□□□ -2.3
CDC42SE1Q9NRR8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
CDC42SE1Q9NRR8 LINC02555-201ENST00000563933 1951 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-433P-201ENST00000363216 104 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 Y_RNA.110-201ENST00000363220 99 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-414P-201ENST00000363705 104 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-960P-201ENST00000364056 120 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 SNORD32B-201ENST00000364460 84 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RNU6-413P-201ENST00000384115 107 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 MIR1294-201ENST00000408503 142 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 BTF3L4P1-201ENST00000413813 468 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AL031779.1-201ENST00000415663 330 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 KATNBL1P3-201ENST00000443475 909 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC007327.1-201ENST00000447461 264 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 HMGN1P5-201ENST00000448591 263 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RPL39P28-201ENST00000465655 155 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 RPS23P4-201ENST00000487908 423 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC106872.3-201ENST00000495104 446 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 AC006499.5-201ENST00000505037 514 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 Y_RNA.687-201ENST00000516558 91 ntBASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
CDC42SE1Q9NRR8 BNIP3P6-201ENST00000549284 499 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms