Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC021382.1-201ENST00000483523 359 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 RNA5SP147-201ENST00000516493 109 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-943P-201ENST00000516960 98 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL160236.1-201ENST00000556317 195 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 BNIP3P5-201ENST00000562290 498 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC009962.1-201ENST00000567327 3813 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR4293-201ENST00000584305 78 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR7853-201ENST00000584820 132 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC022726.1-201ENST00000587475 207 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL137843.1-201ENST00000605078 385 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL357075.2-201ENST00000614906 189 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL031601.2-202ENST00000622650 282 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AC091932.3-201ENST00000624223 323 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR7641-1-201ENST00000627518 61 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA43.4-201ENST00000629559 138 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 AL137790.1-201ENST00000634283 177 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 SCARNA15-201ENST00000607520 4325 ntBASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
KRTAP4-3Q9BYR4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 MIRLET7A1-201ENST00000362295 80 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-369P-201ENST00000362515 102 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-1079P-201ENST00000362861 110 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORD115-37-201ENST00000363768 82 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU4-13P-201ENST00000364019 141 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-484P-201ENST00000384016 107 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-452P-201ENST00000384406 107 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 SNORA18-201ENST00000384416 132 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR10B-201ENST00000385011 110 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR519C-201ENST00000385053 87 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 MIR624-201ENST00000385217 97 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-630P-201ENST00000391258 106 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 Y_RNA.609-201ENST00000410669 89 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU2-40P-201ENST00000410833 196 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RNU6-1245P-201ENST00000411130 106 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 UBE2Q2P12-201ENST00000414573 204 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AC119751.6-201ENST00000416712 186 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AC074117.2-201ENST00000417130 397 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AC245028.1-201ENST00000423259 256 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 EIF4HP2-201ENST00000424380 563 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 COX6CP13-201ENST00000428703 226 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AC068287.1-201ENST00000430283 295 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RBMY2TP-201ENST00000451162 947 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RPS4XP2-201ENST00000458402 793 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 snoU13.1-201ENST00000459157 104 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RPS29P27-201ENST00000463711 170 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RN7SL41P-201ENST00000476144 297 ntBASIC1.63□□□□□ -2.15
KRTAP4-3Q9BYR4 RN7SL432P-201ENST00000484057 298 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms